PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022748855.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 120aa MW: 13637.5 Da PI: 6.7837 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 37.6 | 3.9e-12 | 4 | 98 | 1 | 97 |
EEEE-..-HHHHT......T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlks......grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrs 88 f kvlt++dv ++ + lp++ h + l+++d +g+ W++ + + ++g vl +GW +F +++gL+ gD+v+++ +++ XP_022748855.1 4 FTKVLTTADVERRlsspdiCEPALPRSQG-CH------VMVLQVQDDTGNLWNFGYEI--QPGVrpkLVLVSGWIQFIRSKGLRNGDIVILY--KEE 89 78888888888876444444444454444.22......245999************55..4443347*************************..568 PP EE..EEEEE CS B3 89 efelvvkvf 97 +++++++v XP_022748855.1 90 GAHYKIRVE 98 887777765 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 120 aa Download sequence |
MEIFTKVLTT ADVERRLSSP DICEPALPRS QGCHVMVLQV QDDTGNLWNF GYEIQPGVRP 60 KLVLVSGWIQ FIRSKGLRNG DIVILYKEEG AHYKIRVERS DSEKRISESY IAENHYGSGV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G34390.1 | 2e-09 | ARF family protein |