PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022748465.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 1575aa MW: 175177 Da PI: 6.8312 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.0007 | 1460 | 1485 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C C++sF +k++L+ H r+ + XP_022748465.1 1460 HRCDleGCHMSFETKEELRLHKRNrC 1485 789999****************9877 PP | |||||||
2 | zf-C2H2 | 10.9 | 0.0014 | 1543 | 1569 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022748465.1 1543 YQCKfeGCGLSFRFVSDFSRHRRKtgH 1569 99*********************9777 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 1575 aa Download sequence |
MGNVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SAYGICKIIP PVPKPSKKYV 60 VNNMNRSLSK CPELGSDMDV SMNVGSVSSC GVSGGDEVEE RAVFTTRHQE LGQSGRRIKG 120 MVSSQQCGVQ KQVWQSGQIY TLEQFESKSK TFAKSLLGVH KEVLPLHIEA LFWKAASEKP 180 IYVEYANDVP GSGFGEPEGQ FRYFHRRRRK RMSYRRENSD CKKDEMDTVK NSHIDEIKDT 240 SIKSDSDTCL ETPKSSTTLS TMASDENSHS KRKSGNASND MEGTAGWKLS NSPWNLQVIA 300 RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD 360 YVFAFEEVIR TEAYGGNIDH LAALSLLGEK TTLLSPELIV ASGIPCCRLL QNPGEFVVTF 420 PRAYHVGFSH GFNCGEAANF GTPQWLQIAK EAAVRRAAMN YLPMLSHQQL LYLLTVSFVS 480 RVPRSLLPGA RSSRLRDRLK EEREVLVKKA FIEDLLSENK LLSLLLKRGS TYRAIIWDPD 540 LLPYMSKDSE LPSGTATVST IRQENVSDIH CENKSNQNNL LDEMSLYMEN LNYLYLNDDD 600 LTCDFQVDSG TLACVGCGIL GYPFMCVVQP SEGATMEFLP ADHLLVQGPT VLEPKNSIFC 660 PDLDCRVQGS VSDNVNHVAD LSPPSKDAPL PSITKFSEGW DTSNKYLRPR IFCLEHAVQV 720 EELLHSKGGA KILVICHSDY QKIKAHAIPV AEDIGIPFNY NDVPLRAASQ EDLNLINFAI 780 DDEHDEIGED WTSKLGVNLR YCVKVRKNSP FKQVQHALPL SGLFSDKYVR SELFNIKWKS 840 RKSRSKGKSK HLSPSKACES VEMKVDEILV EKRDGNITKN ERKIIQYSRR KKRKPDYSTG 900 AGGGLKLLKD DLPREDSAAS SQLFDEHGGN QSKINARSES ARLFSSLFTS SIQTQLEIET 960 TSVVGVVQKD LSKILEESEL DDETCSLTAC ASSQKQCEIK LMERSSKNNE ISPADKCSKC 1020 CVVAADERFV ENTAAVSDVC NSVSEGQGEE LAARYDLINL AKSASSHSAQ PSAGRFDPGL 1080 ADITVEKFCM NGGVFSCMTS DVEVQQETEA TSRNNEGILC DNKLINKPNL GSGYFSAGVS 1140 LGNEMQPETV TRGGSQVEPF LSSPTLTKGP GTASMGNRSE VPKEPCAAAD SCDGTVSKNK 1200 VQKQEIQINA GKEGLHSSSI MPVGIDQPTS LAVEEFSVIS KNPCANDQRP DVTLDVEVLQ 1260 EIQATKGTTG DEVISCSNLP IKEKQPTRIV MEACSEVQRE SSSQKKLCAD ATADDDSHEN 1320 YLIRNEKNQE ESVSCCVTPI NQSTISIQKY SRTRIEGHAT VNVNDGGEVE NRNLESAVAN 1380 CRSSAMNGRK RKREQEEIPE KVGGNGFIRS PCEGLRPRAR KDATSGVNVD KTSQEELPTK 1440 ETRRPSIHTQ SKKIIKRGSH RCDLEGCHMS FETKEELRLH KRNRCPYEGC EKKFRSHKYA 1500 ILHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE RPYQCKFEGC GLSFRFVSDF 1560 SRHRRKTGHY MDSSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G04240.1 | 0.0 | C2H2 family protein |