PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748464.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1575aa MW: 175177 Da PI: 6.8312

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748464.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.9	0.0007	1460	1485	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 ++C C++sF +k++L+ H r+ + XP_022748464.1 1460 HRCDleGCHMSFETKEELRLHKRNrC 1485 789999****************9877 PP
2	zf-C2H2	10.9	0.0014	1543	1569	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022748464.1 1543 YQCKfeGCGLSFRFVSDFSRHRRKtgH 1569 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1575 aa Download sequence
MGNVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SAYGICKIIP PVPKPSKKYV 60 VNNMNRSLSK CPELGSDMDV SMNVGSVSSC GVSGGDEVEE RAVFTTRHQE LGQSGRRIKG 120 MVSSQQCGVQ KQVWQSGQIY TLEQFESKSK TFAKSLLGVH KEVLPLHIEA LFWKAASEKP 180 IYVEYANDVP GSGFGEPEGQ FRYFHRRRRK RMSYRRENSD CKKDEMDTVK NSHIDEIKDT 240 SIKSDSDTCL ETPKSSTTLS TMASDENSHS KRKSGNASND MEGTAGWKLS NSPWNLQVIA 300 RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD 360 YVFAFEEVIR TEAYGGNIDH LAALSLLGEK TTLLSPELIV ASGIPCCRLL QNPGEFVVTF 420 PRAYHVGFSH GFNCGEAANF GTPQWLQIAK EAAVRRAAMN YLPMLSHQQL LYLLTVSFVS 480 RVPRSLLPGA RSSRLRDRLK EEREVLVKKA FIEDLLSENK LLSLLLKRGS TYRAIIWDPD 540 LLPYMSKDSE LPSGTATVST IRQENVSDIH CENKSNQNNL LDEMSLYMEN LNYLYLNDDD 600 LTCDFQVDSG TLACVGCGIL GYPFMCVVQP SEGATMEFLP ADHLLVQGPT VLEPKNSIFC 660 PDLDCRVQGS VSDNVNHVAD LSPPSKDAPL PSITKFSEGW DTSNKYLRPR IFCLEHAVQV 720 EELLHSKGGA KILVICHSDY QKIKAHAIPV AEDIGIPFNY NDVPLRAASQ EDLNLINFAI 780 DDEHDEIGED WTSKLGVNLR YCVKVRKNSP FKQVQHALPL SGLFSDKYVR SELFNIKWKS 840 RKSRSKGKSK HLSPSKACES VEMKVDEILV EKRDGNITKN ERKIIQYSRR KKRKPDYSTG 900 AGGGLKLLKD DLPREDSAAS SQLFDEHGGN QSKINARSES ARLFSSLFTS SIQTQLEIET 960 TSVVGVVQKD LSKILEESEL DDETCSLTAC ASSQKQCEIK LMERSSKNNE ISPADKCSKC 1020 CVVAADERFV ENTAAVSDVC NSVSEGQGEE LAARYDLINL AKSASSHSAQ PSAGRFDPGL 1080 ADITVEKFCM NGGVFSCMTS DVEVQQETEA TSRNNEGILC DNKLINKPNL GSGYFSAGVS 1140 LGNEMQPETV TRGGSQVEPF LSSPTLTKGP GTASMGNRSE VPKEPCAAAD SCDGTVSKNK 1200 VQKQEIQINA GKEGLHSSSI MPVGIDQPTS LAVEEFSVIS KNPCANDQRP DVTLDVEVLQ 1260 EIQATKGTTG DEVISCSNLP IKEKQPTRIV MEACSEVQRE SSSQKKLCAD ATADDDSHEN 1320 YLIRNEKNQE ESVSCCVTPI NQSTISIQKY SRTRIEGHAT VNVNDGGEVE NRNLESAVAN 1380 CRSSAMNGRK RKREQEEIPE KVGGNGFIRS PCEGLRPRAR KDATSGVNVD KTSQEELPTK 1440 ETRRPSIHTQ SKKIIKRGSH RCDLEGCHMS FETKEELRLH KRNRCPYEGC EKKFRSHKYA 1500 ILHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE RPYQCKFEGC GLSFRFVSDF 1560 SRHRRKTGHY MDSSA

Sequence ? help Back to Top

Protein Sequence Length: 1575 aa Download sequence

MGNVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA SAYGICKIIP PVPKPSKKYV  60
VNNMNRSLSK CPELGSDMDV SMNVGSVSSC GVSGGDEVEE RAVFTTRHQE LGQSGRRIKG  120
MVSSQQCGVQ KQVWQSGQIY TLEQFESKSK TFAKSLLGVH KEVLPLHIEA LFWKAASEKP  180
IYVEYANDVP GSGFGEPEGQ FRYFHRRRRK RMSYRRENSD CKKDEMDTVK NSHIDEIKDT  240
SIKSDSDTCL ETPKSSTTLS TMASDENSHS KRKSGNASND MEGTAGWKLS NSPWNLQVIA  300
RSAGSLTRFM PDDIPGVTSP MVYIGMLFSW FAWHVEDHEL HSMNFLHTGS SKTWYAVPGD  360
YVFAFEEVIR TEAYGGNIDH LAALSLLGEK TTLLSPELIV ASGIPCCRLL QNPGEFVVTF  420
PRAYHVGFSH GFNCGEAANF GTPQWLQIAK EAAVRRAAMN YLPMLSHQQL LYLLTVSFVS  480
RVPRSLLPGA RSSRLRDRLK EEREVLVKKA FIEDLLSENK LLSLLLKRGS TYRAIIWDPD  540
LLPYMSKDSE LPSGTATVST IRQENVSDIH CENKSNQNNL LDEMSLYMEN LNYLYLNDDD  600
LTCDFQVDSG TLACVGCGIL GYPFMCVVQP SEGATMEFLP ADHLLVQGPT VLEPKNSIFC  660
PDLDCRVQGS VSDNVNHVAD LSPPSKDAPL PSITKFSEGW DTSNKYLRPR IFCLEHAVQV  720
EELLHSKGGA KILVICHSDY QKIKAHAIPV AEDIGIPFNY NDVPLRAASQ EDLNLINFAI  780
DDEHDEIGED WTSKLGVNLR YCVKVRKNSP FKQVQHALPL SGLFSDKYVR SELFNIKWKS  840
RKSRSKGKSK HLSPSKACES VEMKVDEILV EKRDGNITKN ERKIIQYSRR KKRKPDYSTG  900
AGGGLKLLKD DLPREDSAAS SQLFDEHGGN QSKINARSES ARLFSSLFTS SIQTQLEIET  960
TSVVGVVQKD LSKILEESEL DDETCSLTAC ASSQKQCEIK LMERSSKNNE ISPADKCSKC  1020
CVVAADERFV ENTAAVSDVC NSVSEGQGEE LAARYDLINL AKSASSHSAQ PSAGRFDPGL  1080
ADITVEKFCM NGGVFSCMTS DVEVQQETEA TSRNNEGILC DNKLINKPNL GSGYFSAGVS  1140
LGNEMQPETV TRGGSQVEPF LSSPTLTKGP GTASMGNRSE VPKEPCAAAD SCDGTVSKNK  1200
VQKQEIQINA GKEGLHSSSI MPVGIDQPTS LAVEEFSVIS KNPCANDQRP DVTLDVEVLQ  1260
EIQATKGTTG DEVISCSNLP IKEKQPTRIV MEACSEVQRE SSSQKKLCAD ATADDDSHEN  1320
YLIRNEKNQE ESVSCCVTPI NQSTISIQKY SRTRIEGHAT VNVNDGGEVE NRNLESAVAN  1380
CRSSAMNGRK RKREQEEIPE KVGGNGFIRS PCEGLRPRAR KDATSGVNVD KTSQEELPTK  1440
ETRRPSIHTQ SKKIIKRGSH RCDLEGCHMS FETKEELRLH KRNRCPYEGC EKKFRSHKYA  1500
ILHQRVHEDD RPLKCPWKGC SMSFKWAWAR TEHIRVHTGE RPYQCKFEGC GLSFRFVSDF  1560
SRHRRKTGHY MDSSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein