PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022748260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 287aa MW: 32256 Da PI: 6.6765 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C + F++ L H+++H XP_022748260.1 55 YSCSFCRREFRSAQALGGHMNVH 77 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 287 aa Download sequence |
MEQAQYWMWM RRRHELLKSH FQESMNSLSD SWEEKAFAED SAGSFGGFIW PPRSYSCSFC 60 RREFRSAQAL GGHMNVHRRD RARLQQSLSP SNEVVPLQNH NHNPEPKFPY DQACSFDHST 120 DDLDHNSTSP SIVASTFSAS RVLALSTQET FSTSSIVQEQ HKGQLFGSDS TAKRTLINIV 180 SSDSKPEAQK SINLVGEDSM GLGSDDHVET NLSVGLNSVF FQNRPTVTCG EEAINYKRPK 240 VAVSTLPFLV SKEKYSPLQW QVLGLKPANS MEDLDLELRL GVLPKVK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06070.1 | 1e-30 | C2H2 family protein |