PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022748260.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 287aa    MW: 32256 Da    PI: 6.6765
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022748260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.00025577123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y+C+ C + F++   L  H+++H
  XP_022748260.1 55 YSCSFCRREFRSAQALGGHMNVH 77
                    99*******************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEQAQYWMWM RRRHELLKSH FQESMNSLSD SWEEKAFAED SAGSFGGFIW PPRSYSCSFC  60
RREFRSAQAL GGHMNVHRRD RARLQQSLSP SNEVVPLQNH NHNPEPKFPY DQACSFDHST  120
DDLDHNSTSP SIVASTFSAS RVLALSTQET FSTSSIVQEQ HKGQLFGSDS TAKRTLINIV  180
SSDSKPEAQK SINLVGEDSM GLGSDDHVET NLSVGLNSVF FQNRPTVTCG EEAINYKRPK  240
VAVSTLPFLV SKEKYSPLQW QVLGLKPANS MEDLDLELRL GVLPKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06070.11e-30C2H2 family protein