PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022748209.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 518aa MW: 56376 Da PI: 9.3027

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022748209.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.6	2.2e-05	84	106	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022748209.1 84 FVCEICSKGFQRDQNLQLHRRGH 106 89*******************88 PP
2	zf-C2H2	11.6	0.00086	160	182	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + ks+ k H +t+ XP_022748209.1 160 WKCDKCSKKYAVKSDWKAHSKTC 182 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MSNITAGDGG SLSSGNTAGE VQQEQVNHFH GSNSLLSTNS NGSNTPQDHQ PPPAKKKRNL 60 PGTPDPNAEV IALSPRTLLA TNRFVCEICS KGFQRDQNLQ LHRRGHNLPW KLRQRTSTEI 120 RKRVYVCPEP SCVHHNPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA VKSDWKAHSK 180 TCGTKEYKCD CGTIFSRRDS FITHRAFCDA LTEENKKASQ GLVANLGSNL QGQVPDQLIP 240 AIPINDNLNT SSMNVSDPFS HDTKSPLQPL SMAGSMFSIS PGNLFAGAKT HVSNYSSSCL 300 QLNANSSTLF EGNGHLFSGS ASMSATALLQ KAAQMGAAAS TGSLNSPLMG KSFTTTMAPT 360 PSFVSMQTQN NQSEILGGDA GFTNQFMQKS QQEIQSELFN ANTGVDQSSA VNNMRMFSGD 420 FDKNNALLKS LENDQPGASS NSGLSTPRTT GLSAFSGDTM TVDFLGIGGS RSRSLLEKQH 480 HHRQQQDLDQ FRGIEQARLQ GLSHYQQYAA LEKPMWKV

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MSNITAGDGG SLSSGNTAGE VQQEQVNHFH GSNSLLSTNS NGSNTPQDHQ PPPAKKKRNL  60
PGTPDPNAEV IALSPRTLLA TNRFVCEICS KGFQRDQNLQ LHRRGHNLPW KLRQRTSTEI  120
RKRVYVCPEP SCVHHNPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA VKSDWKAHSK  180
TCGTKEYKCD CGTIFSRRDS FITHRAFCDA LTEENKKASQ GLVANLGSNL QGQVPDQLIP  240
AIPINDNLNT SSMNVSDPFS HDTKSPLQPL SMAGSMFSIS PGNLFAGAKT HVSNYSSSCL  300
QLNANSSTLF EGNGHLFSGS ASMSATALLQ KAAQMGAAAS TGSLNSPLMG KSFTTTMAPT  360
PSFVSMQTQN NQSEILGGDA GFTNQFMQKS QQEIQSELFN ANTGVDQSSA VNNMRMFSGD  420
FDKNNALLKS LENDQPGASS NSGLSTPRTT GLSAFSGDTM TVDFLGIGGS RSRSLLEKQH  480
HHRQQQDLDQ FRGIEQARLQ GLSHYQQYAA LEKPMWKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-105	C2H2 family protein