PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022747632.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YA | ||||||||
Protein Properties | Length: 328aa MW: 35760.4 Da PI: 9.4503 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 96.4 | 3.2e-30 | 160 | 216 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 d p+YVNaKQy++I++RRq+Rak+ e+k+ +k+rkpy+h SRh hA+rRpRg+gGrF XP_022747632.1 160 DGPIYVNAKQYNGIIRRRQSRAKAVLENKI-TKARKPYMHYSRHLHAMRRPRGCGGRF 216 57****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence |
MAMQTLYLKE HDGIVHNPLG QLDSVPSLPW WSGLGSQSVY GESCGQLKPL LMEHPSGGDQ 60 VTSTKQADRG TEQELNKGNP ARFTIFPGDC KNSGDGHKPH AVISLQSAPS EHRARFELGF 120 GQPTVCAKYP YMDQCYGVFS TYGPQISGRV MLPLNLATED GPIYVNAKQY NGIIRRRQSR 180 AKAVLENKIT KARKPYMHYS RHLHAMRRPR GCGGRFLNTK VSNSDKDGIG MKKAAQGLLS 240 HPTGSPNSEG LQSDSGTLNS SKEANAGGST LSGSEVTSMY SRVDLEHFPI NQLGLSVHSL 300 PRMMDNGRGT VMPNKWVATA DNCCNLKV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06510.2 | 2e-68 | NF-YA family protein |