PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022747394.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 242aa    MW: 26555.8 Da    PI: 7.3115
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022747394.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.41.4e-39411421101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r+da+ ++ yeA+ar++dPvyG+v++il+lqqq+++l+ael
  XP_022747394.1  41 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPMNRRHDAVVTISYEAQARLSDPVYGCVSTILSLQQQVASLQAEL 135
                     7***********************9989******************************************************************* PP

          DUF260  95 allkeel 101
                     a+++++l
  XP_022747394.1 136 AMVQNQL 142
                     ***9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MAEPQCHGVS ETRRKGTGKR ATMPVEAEPG VAELAPVPAS PCGACKFLRR KCISGCIFAP  60
HFGSDQGAAR FAAVHKVFGA SNVSKLLLHI PMNRRHDAVV TISYEAQARL SDPVYGCVST  120
ILSLQQQVAS LQAELAMVQN QLINSRFVMA NALQSSQQQQ QQQQHHEQHI ALLQPSYSNN  180
SSASNNLINI SNFTHNFDLV AETTAPNSSQ SMDRLQLSRP CHDDEDDEQD SQIPAIFANH  240
RR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03760.12e-62LBD family protein