PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746889.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 368aa MW: 41787.3 Da PI: 6.447

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746889.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.4	2.5e-05	207	226	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r n++ H+ XP_022746889.1 207 FSCPVCYKTFNRYNNMQMHM 226 89*****************9 PP
2	zf-C2H2	14.5	0.00011	291	313	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022746889.1 291 FMCRKCGKAFAVRGDWRTHEKNC 313 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MADYPYSNFF SGWFKFNPFQ HYPSPNPPPQ HHPNSYTQNF YRNSTSFITN ETSNNHPFFH 60 YQTTCSSSSP PSPPVREALP LLSLSPTRYE KEDQEQDDED LDQDQEQYSC STMDVDKSKG 120 KEEGRLFFTN GIAADAAADE DETVTVALHI GLPNPSASEL ASVLSSSSEI TDKDGDGDDS 180 GYPVNRLNKG QYWIPTPSQI LIGPTQFSCP VCYKTFNRYN NMQMHMWGHG SQYRKGPESL 240 RGTQPTGMLR LPCYCCTPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP FMCRKCGKAF 300 AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHAVYGIDGL EEDDEPASEV 360 EQDNESMQ

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MADYPYSNFF SGWFKFNPFQ HYPSPNPPPQ HHPNSYTQNF YRNSTSFITN ETSNNHPFFH  60
YQTTCSSSSP PSPPVREALP LLSLSPTRYE KEDQEQDDED LDQDQEQYSC STMDVDKSKG  120
KEEGRLFFTN GIAADAAADE DETVTVALHI GLPNPSASEL ASVLSSSSEI TDKDGDGDDS  180
GYPVNRLNKG QYWIPTPSQI LIGPTQFSCP VCYKTFNRYN NMQMHMWGHG SQYRKGPESL  240
RGTQPTGMLR LPCYCCTPGC RNNIDHPRAK PLKDFRTLQT HYKRKHGIKP FMCRKCGKAF  300
AVRGDWRTHE KNCGKLWYCI CGSDFKHKRS LKDHIKAFGN GHAVYGIDGL EEDDEPASEV  360
EQDNESMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-135	C2H2 family protein