PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746393.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 492aa MW: 53614.9 Da PI: 9.7069

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746393.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.2	3e-05	63	85	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022746393.1 63 FICEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP
2	zf-C2H2	12.8	0.00036	139	161	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022746393.1 139 WKCEKCSKKYAVQSDWKAHSKTC 161 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MSGDGFSVPD SRGGFVQDQN NENPNPKSYP NPVKKKRSLP GTPDPDAEVV ALSPKTLMAT 60 NRFICEICNK GFQRDQNLQL HRRGHNLPWK LRQRTNTEVR KKVYICPEKT CVHHDPSRAL 120 GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF 180 ITHRAFCDAL AEESARLTSV AATNLNFGND NVNLPHGFAG PGVQDVAGIP QFGSGFAQDF 240 NGMSAAGLPK MVRLASGNLF GSTSLTNFGS QGHFPGFDKS GVTSKNSNLS LSPLPQVLKE 300 EDESKGNLME RLPSLYPDTQ NKQSKPAAPM SATALLQKAA QMGSTRSNPS FFGSSFGVMS 360 PSFSHTASSS STQNGNDQLH QVYPNVKQQE NFMASSSVST SADAGLRSSN LNSLTSATSN 420 NLDQLMLQTE AKQGDPSQLK MHPGPNSIDQ SLTRDFLGMS NDQSSRPFLR QELAKFASIG 480 STMGLSQFAS NH

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MSGDGFSVPD SRGGFVQDQN NENPNPKSYP NPVKKKRSLP GTPDPDAEVV ALSPKTLMAT  60
NRFICEICNK GFQRDQNLQL HRRGHNLPWK LRQRTNTEVR KKVYICPEKT CVHHDPSRAL  120
GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF  180
ITHRAFCDAL AEESARLTSV AATNLNFGND NVNLPHGFAG PGVQDVAGIP QFGSGFAQDF  240
NGMSAAGLPK MVRLASGNLF GSTSLTNFGS QGHFPGFDKS GVTSKNSNLS LSPLPQVLKE  300
EDESKGNLME RLPSLYPDTQ NKQSKPAAPM SATALLQKAA QMGSTRSNPS FFGSSFGVMS  360
PSFSHTASSS STQNGNDQLH QVYPNVKQQE NFMASSSVST SADAGLRSSN LNSLTSATSN  420
NLDQLMLQTE AKQGDPSQLK MHPGPNSIDQ SLTRDFLGMS NDQSSRPFLR QELAKFASIG  480
STMGLSQFAS NH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	102	KLRQRTNTEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03150.1	1e-133	C2H2 family protein