PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022746202.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 298aa    MW: 32735.1 Da    PI: 8.0641
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022746202.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2120.00063233255223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp Cg  Fs+  +L+ H  + H
  XP_022746202.1 233 ECPRCGAKFSSVTTLVEHVEKvH 255
                     5*****************99888 PP

2zf-C2H216.32.7e-05270292223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp+C k F+++  L+ H  + H
  XP_022746202.1 270 VCPKCRKGFRDPVALVEHVERdH 292
                     7*****************99888 PP

Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MGTPEFPDLG KHCSVEDCKQ IDFLPFTCDH CHLVYCLEHR SYIKHHCPKA DKKDVTVVIC  60
PLCAKGVHLI PDEDPNITWE THVNTECDPS NYDKVTKKKK CPAPGCREVL TFSNTIKCRD  120
CTIDHCLKHR FGPDHKCPGP KKPDSGFPFM GLLSLSRKEE SKPNGAPATS SSKWATSFLN  180
AASSVRASAE ASMTKLSSEI SQKWQIARDG VGLSSSSSSS SSSNSGSAGQ VEECPRCGAK  240
FSSVTTLVEH VEKVHERNNQ SRVFKTSIDV CPKCRKGFRD PVALVEHVER DHGGTSKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-123C2H2 family protein