PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746130.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 419aa MW: 46648.9 Da PI: 8.3272

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746130.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	41.8	2.7e-13	64	120	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ ++k+ g ++ +e Aa+a++ a++k++g XP_022746130.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnQNKKGKQGAYDDEEAAARAYDLAALKYWG 120 57*****************6666777775555599****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG 120 PGTLINFPVT DYTRDLEEMQ NVSREEYLAS LRRKSSGFSR GISKYRGLSS RWDSSFGRVA 180 GSEYFNSIHY SDDPTIESDY IGGFCIERKI DLTGHIKWWA TNKTRQAEHG SKSSEETKHA 240 CPEDIGSELK TSEWAVQPTE PYQMPRLGTS LEGTKHKGSC VSALSILSRS PDFENLQEKA 300 RKKQEKNADN DENENKNTIN KMDHGKAVEK SENQGTGSER LGATLGMRGG LSLQKNVLPL 360 TPFLSAPLLT NYNTIDSLVD PVLWTSLVPV LPSGPSCNPE VGVTKTETSS SYTFFRPEE

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG  60
KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQGA YDDEEAAARA YDLAALKYWG  120
PGTLINFPVT DYTRDLEEMQ NVSREEYLAS LRRKSSGFSR GISKYRGLSS RWDSSFGRVA  180
GSEYFNSIHY SDDPTIESDY IGGFCIERKI DLTGHIKWWA TNKTRQAEHG SKSSEETKHA  240
CPEDIGSELK TSEWAVQPTE PYQMPRLGTS LEGTKHKGSC VSALSILSRS PDFENLQEKA  300
RKKQEKNADN DENENKNTIN KMDHGKAVEK SENQGTGSER LGATLGMRGG LSLQKNVLPL  360
TPFLSAPLLT NYNTIDSLVD PVLWTSLVPV LPSGPSCNPE VGVTKTETSS SYTFFRPEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-155	AP2 family protein