PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746128.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 421aa MW: 46955.3 Da PI: 8.3238

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746128.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	64	123	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022746128.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVTDYTRDLE EMQNVSREEY LASLRRKSSG FSRGISKYRG LSSSRWDSSF 180 GRVAGSEYFN SIHYSDDPTI ESDYIGGFCI ERKIDLTGHI KWWATNKTRQ AEHGSKSSEE 240 TKHACPEDIG SELKTSEWAV QPTEPYQMPR LGTSLEGTKH KGSCVSALSI LSRSPDFENL 300 QEKARKKQEK NADNDENENK NTINKMDHGK AVEKSENQGT GSERLGATLG MRGGLSLQKN 360 VLPLTPFLSA PLLTNYNTID SLVDPVLWTS LVPVLPSGPS CNPEVTKTET SSSYTFFRPE 420 E

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG  60
KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK  120
YWGPGTLINF PVTDYTRDLE EMQNVSREEY LASLRRKSSG FSRGISKYRG LSSSRWDSSF  180
GRVAGSEYFN SIHYSDDPTI ESDYIGGFCI ERKIDLTGHI KWWATNKTRQ AEHGSKSSEE  240
TKHACPEDIG SELKTSEWAV QPTEPYQMPR LGTSLEGTKH KGSCVSALSI LSRSPDFENL  300
QEKARKKQEK NADNDENENK NTINKMDHGK AVEKSENQGT GSERLGATLG MRGGLSLQKN  360
VLPLTPFLSA PLLTNYNTID SLVDPVLWTS LVPVLPSGPS CNPEVTKTET SSSYTFFRPE  420
E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-159	AP2 family protein