PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022746127.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 422aa MW: 47024.4 Da PI: 8.3238

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022746127.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.8e-17	64	123	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022746127.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVTDYTRDLE EMQNVSREEY LASLRRKSSG FSRGISKYRG LSSRWDSSFG 180 RVAGSEYFNS IHYSDDPTIE SDYIGGFCIE RKIDLTGHIK WWATNKTRQA EHGSKSSEET 240 KHACPEDIGS ELKTSEWAVQ PTEPYQMPRL GTSLEGTKHK GSCVSALSIL SRSPDFENLQ 300 EKARKKQEKN ADNDENENKN TINKMDHGKA VEKSENQGTG SERLGATLGM RGGLSLQKNV 360 LPLTPFLSAP LLTNYNTIDS LVDPVLWTSL VPVLPSGPSC NPEVGVTKTE TSSSYTFFRP 420 EE

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MASTSSSEPG MKAEASGGEN SETVIANDQL LLYRGLKKAK KERGCTAKER ISKMPPCTAG  60
KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK  120
YWGPGTLINF PVTDYTRDLE EMQNVSREEY LASLRRKSSG FSRGISKYRG LSSRWDSSFG  180
RVAGSEYFNS IHYSDDPTIE SDYIGGFCIE RKIDLTGHIK WWATNKTRQA EHGSKSSEET  240
KHACPEDIGS ELKTSEWAVQ PTEPYQMPRL GTSLEGTKHK GSCVSALSIL SRSPDFENLQ  300
EKARKKQEKN ADNDENENKN TINKMDHGKA VEKSENQGTG SERLGATLGM RGGLSLQKNV  360
LPLTPFLSAP LLTNYNTIDS LVDPVLWTSL VPVLPSGPSC NPEVGVTKTE TSSSYTFFRP  420
EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-159	AP2 family protein