PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022745502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | HB-PHD | ||||||||
Protein Properties | Length: 980aa MW: 108642 Da PI: 5.4437 | ||||||||
Description | HB-PHD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 37.2 | 4.9e-12 | 897 | 938 | 11 | 52 |
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++L + F++n+yp+++++e LAk+l++t +qV+ WF N R XP_022745502.1 897 VKQRLHSSFKENQYPDRATKESLAKELEMTFQQVSKWFENAR 938 6789************************************99 PP | |||||||
2 | PHD | 34.5 | 4.8e-12 | 526 | 581 | 1 | 51 |
SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS PHD 1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 +C+ Cg+ ++++++lCdg C+ fH++Cl+++l +e++p + wlC++C++k XP_022745502.1 526 FCAKCGSkdLSSNNDIILCDGaCDCGFHQYCLQPPLLKEDIPPDheGWLCPRCDCK 581 699***977667********66*******************99999*******985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 980 aa Download sequence |
MYVHSSSRIA AEKSPSLSLS VCLLKTRDSI LLTDMIKVEH MGVSPSRAKS KKENHCCPEE 60 STSQQAHEFG SEYLHSELSE NKHRCGCAVT QNESAEIATC VSSSAIHEPS SEYVAKNSSP 120 EHLGLLPKGA SGHDHTDKSF YPQETVSGKT HKYCSQYVNK ETSENKNQPS SEIVQNELEE 180 ACTFVCGLPA KHLQPFSEDL SKNAITEGLG LPPDDSSKCN QTDKLSCPQL DSSEPTVDFG 240 SGNMRKKLCE PLEQRQELDS KGLPNGIEKS TTAVSSNVFN QILQLNPEDM NKSHCSRHLQ 300 SPPEGASSVI QTSKSSPVEP LRLLQEFAAG NPSIQQPSFH IEDMAKNSGA EQHEIMPKNL 360 LKNSGRCRDG KTSKRMKKKY MLRSLTSSDR ILRSKSQDKP KATESSNILA DVGSSEQQKR 420 RKRKKRKAKR EVADEYSRIR AHLRYLLNRM NYEQSLIAVY SAEGWKGLSL EKLKPEKELQ 480 RATSEILRLK LKIRDLFQRI DSLCAEGRLP ESLFDSEGQI DSEDIFCAKC GSKDLSSNND 540 IILCDGACDC GFHQYCLQPP LLKEDIPPDH EGWLCPRCDC KVDCIELVNE SQGTSFSLTD 600 SWEKVFPEAA VAAGGQNQDP NFGLPSDDSD DNDYNPDSSE TDEKDWGDES SSDESDFTST 660 SEELEAPAKV NPYLELRSDD SEDDDYDPNG PDHDNAVKPE SSSSDFTSDS EDLGAMLEDN 720 ISSQKEEGAV FINASRDSKR QKPKLGGRES LNDELLSVME SASEQDGAAA SKKRSIERLD 780 YKRLYDETYG SVSSSSSDDD YWNDATALRK RKKCAAEAAS AAAANGNVSV SRSVSVSDGL 840 KLYPEGTEHK PRRKTRQKSN LKDTDLSPAE LQVGTSVSGS SGKKVGSSTY RRLGEAVKQR 900 LHSSFKENQY PDRATKESLA KELEMTFQQV SKWFENARWS FNNSPSINET TAKKVSENDI 960 TSARPKKNCK MVTEKDKSKC |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 417 | 425 | QQKRRKRKK |
2 | 418 | 427 | QKRRKRKKRK |
3 | 419 | 425 | KRRKRKK |
4 | 419 | 427 | KRRKRKKRK |
5 | 419 | 430 | KRRKRKKRKAKR |
6 | 420 | 426 | KRRKRKK |
7 | 421 | 427 | KRRKRKK |
8 | 421 | 425 | RKRKK |
9 | 422 | 430 | KRRKRKKRK |
10 | 809 | 813 | RKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19510.1 | 2e-88 | HB-PHD family protein |