PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022745051.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 418aa MW: 46606.1 Da PI: 9.3351

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022745051.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.1	3.7e-17	64	123	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022745051.1 64 SIYRGVTRHRWTGRYEAHLWDkSTWNQnqnKKgKQVYLGAYDDEEAAARAYDLAALKYWG 123 57*****************766644468557***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MSSTSLSDPG MKAEASGGEN SETVIANDQL LLYKGLKKAK KERGCTAKER ISKMPPCTAG 60 KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK 120 YWGPGTLINF PVADYTRDLE EMQNLSREDY LASLRRKSSG FSRGISKYRG LSSRWDSSFR 180 RVAASEYFKG IPYSDDPATE SDYLGGLCIE RKIDLTSYIK WWGTNKTRQA ESGTKSSEET 240 RRACPEDIGS ELKTPEWAVQ PTEPYQLPRL GTSLEGTKRK GSPVSALSIL SRSADFKSLQ 300 EKALKKQEKT ADNDENENKN TTNKIDHGKA PEKSVNHDSD RLGPTLGVSG GLSLQKNVFP 360 LTPFLSAPLL TNYNTIDSLV DPVLWTSLVP VLPTGPSRNP EVTKTETSST YTLFRPEE

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MSSTSLSDPG MKAEASGGEN SETVIANDQL LLYKGLKKAK KERGCTAKER ISKMPPCTAG  60
KRSSIYRGVT RHRWTGRYEA HLWDKSTWNQ NQNKKGKQVY LGAYDDEEAA ARAYDLAALK  120
YWGPGTLINF PVADYTRDLE EMQNLSREDY LASLRRKSSG FSRGISKYRG LSSRWDSSFR  180
RVAASEYFKG IPYSDDPATE SDYLGGLCIE RKIDLTSYIK WWGTNKTRQA ESGTKSSEET  240
RRACPEDIGS ELKTPEWAVQ PTEPYQLPRL GTSLEGTKRK GSPVSALSIL SRSADFKSLQ  300
EKALKKQEKT ADNDENENKN TTNKIDHGKA PEKSVNHDSD RLGPTLGVSG GLSLQKNVFP  360
LTPFLSAPLL TNYNTIDSLV DPVLWTSLVP VLPTGPSRNP EVTKTETSST YTLFRPEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41710.1	1e-150	AP2 family protein