PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022744579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 303aa MW: 34160 Da PI: 7.5686 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.6 | 2.2e-05 | 55 | 77 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ Cg+ F++ L H+++H XP_022744579.1 55 YSCNFCGREFRSAQALGGHMNVH 77 99*******************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 303 aa Download sequence |
MEQAQYWMWT KRRHGLSSHL QASANATYDD SWEEQAFAED TAGSLGGCIW PPRSYSCNFC 60 GREFRSAQAL GGHMNVHRRD RARLKQSSTS QDEIPHHNHQ NSQNSIQNPF LPMGFQYQPG 120 EVCNFVYNPN PNSHHGTLPS PSSTSRASPP PNKENCPEQT LVPPFCSPII QEHPNMSPNL 180 SPKSSSNLVA DRYYRFPDLR TEGEKSPRIL ESGCRLKADY VQTDLSVSLN LVVRRPRPTT 240 SGSTEETVGC KRKRTDTPTL PFFLKPISIE RHHLQPAEVP ELSPSSVDDI DLELRLGDRP 300 KVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06070.1 | 4e-26 | C2H2 family protein |