PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744325.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 337aa MW: 37065 Da PI: 6.8975

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744325.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.7	0.00079	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H XP_022744325.1 140 YECKTCNRTFPSFQALGGHRASH 162 99**********99999998887 PP
2	zf-C2H2	13.1	0.00028	227	249	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_022744325.1 227 HECSICGAEFTSGQALGGHMRRH 249 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MEAPEEVAMG SKDHSNIVKG KRTKRLRPQS PIPFAITSNN LICNGEGGEF EGSPNVENKN 60 IYTQYLLPSS SSSSEYQDST EEEEDMANCL ILLAQGQSRE STKSQSDDHH HDTGIYNKFT 120 SRKFMEAASN GTGKAGYYVY ECKTCNRTFP SFQALGGHRA SHKKLKAASA AAMVDEKIRR 180 FTAAAASDEE EGQFIKTNNL SSLSLQLSNN NNTNRGLYSN NNKAKVHECS ICGAEFTSGQ 240 ALGGHMRRHR GPIGSNSTTT ASTALSLTVP MAMESMEPKK PRNVLSLDLD LNLPAPEDDH 300 RESKFSFAPT QQQQQQQQQQ QQSPLVFSAP TLVDCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	8e-64	C2H2 family protein