PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022744319.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 478aa MW: 52800.7 Da PI: 8.5397

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022744319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	52.7	1e-16	165	214	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+++k++grW+++I+d + k+++lg f ta Aa+a+++a+ k++g XP_022744319.1 165 SQYRGVTFYKRTGRWESHIWD------CgKQVYLGGFETAHAAARAYDRAAIKFRG 214 78*****************......55**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MLDLNVDIVL SESSCDENNK MLINGDKLPE AVTFTQMEDS GSTNSSIIND ENVPSNAGDE 60 NSSNNASAFI FDILKKETHD TTTTNNAKKV ENTSTGFVTE QLFPVTREKG SLELEFGTSF 120 GTQSLLRPQW LNLSYAESSG EAELKTVQMK PQPRKSRRGP RSRSSQYRGV TFYKRTGRWE 180 SHIWDCGKQV YLGGFETAHA AARAYDRAAI KFRGVDADLN FSLSDYDEDR KQMKHMSKEE 240 FVHILRRQCA GFPRGSSKYR EVTLHKCGRW EARMGQFLGK KAYDKAAMKC NGREAVTNFE 300 PSTYEGEITN SGGGNRHNLD LSLGISAPSV AQNGSNNAGE FHFHQAAASA GQRSVFERSA 360 STPVGVQPQH CLTIASKHPH ILSGVCPALL PNSKERAMEK RVEAVSSTRF SDWPWQMQGN 420 GNITPTPVFP IAASSGFAPS SATASSTTFP FNNSVRNICL PMPVTSTNNN SRYYSYRS

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MLDLNVDIVL SESSCDENNK MLINGDKLPE AVTFTQMEDS GSTNSSIIND ENVPSNAGDE  60
NSSNNASAFI FDILKKETHD TTTTNNAKKV ENTSTGFVTE QLFPVTREKG SLELEFGTSF  120
GTQSLLRPQW LNLSYAESSG EAELKTVQMK PQPRKSRRGP RSRSSQYRGV TFYKRTGRWE  180
SHIWDCGKQV YLGGFETAHA AARAYDRAAI KFRGVDADLN FSLSDYDEDR KQMKHMSKEE  240
FVHILRRQCA GFPRGSSKYR EVTLHKCGRW EARMGQFLGK KAYDKAAMKC NGREAVTNFE  300
PSTYEGEITN SGGGNRHNLD LSLGISAPSV AQNGSNNAGE FHFHQAAASA GQRSVFERSA  360
STPVGVQPQH CLTIASKHPH ILSGVCPALL PNSKERAMEK RVEAVSSTRF SDWPWQMQGN  420
GNITPTPVFP IAASSGFAPS SATASSTTFP FNNSVRNICL PMPVTSTNNN SRYYSYRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28550.1	8e-89	AP2 family protein