PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022744282.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 390aa    MW: 43512.5 Da    PI: 7.8147
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022744282.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025294316123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  Fs+   L  H+r+H
  XP_022744282.1 294 HECSICGAEFSSGQALGGHMRRH 316
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MSCNNTFYSL PYYIQFCIFM FCLYILVNFQ GWKHNTGKAN SRISVHKGFN LFSFFPLFFV  60
FFFFFLTLIL PDRNLSLKLT YLLSSPIYIQ LFSLQVCYCI ELEMMMMEDQ EEVVVCKDQV  120
QIIKGKRTKR PRPLSPLTLA MASSTTSSGG ESGGEGGRNS DDSRGFDRAV ASTTTSVELA  180
ESTEEEEDMA NCLILLAQGQ TGKPSEPTSS SATTSKTGIY VHQCKTCNRC FPSFQALGGH  240
RASHKKPKVH NEENNKGLIF VKEDNDQFNN MNTTLSLQIT HRAVLCNSSK SKVHECSICG  300
AEFSSGQALG GHMRRHRTLT NAAITATTTL SVGTRSSPES EESKKPRTVL QLDLNLPAPE  360
DDHHRESKLS FASKEKLLAF SASNLVDCHY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129133KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.11e-43C2H2 family protein