PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743597.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 404aa MW: 45671.9 Da PI: 7.0199

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.3	0.00012	327	349	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ XP_022743597.1 327 FMCRKCGKAFAVRGDWRTHEKNC 349 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 404 aa Download sequence
MHSLAFYLSI KANQSSLNCS EFLSLKKNPF FSTMADYPYS NFFSGWFKFN PLQHYSSPDT 60 PPQQQPNFYT QNLYSNTNFV RNETSNFNPL FHYQTTCSSS SSAPSPPVRE ALPLLSLSPT 120 RHDKEDQEQD DEEQDQDQEL YACTAMDVDK RKGKEEVRRL LLSNYNSGAA AAAAVEDETV 180 TVALHIGLPS PSASELASVL SSSSEITDKD GDGDDSGYPF NRLNKGQYWI PTPSQILIGP 240 TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTGMLRLPCY CCAPGCRNNI 300 DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG RLWYCICGSD 360 FKHKRSLKDH IKAFGNGHAA YGIDGLEEDD DPASEVEQDN DSMH

Sequence ? help Back to Top

Protein Sequence Length: 404 aa Download sequence

MHSLAFYLSI KANQSSLNCS EFLSLKKNPF FSTMADYPYS NFFSGWFKFN PLQHYSSPDT  60
PPQQQPNFYT QNLYSNTNFV RNETSNFNPL FHYQTTCSSS SSAPSPPVRE ALPLLSLSPT  120
RHDKEDQEQD DEEQDQDQEL YACTAMDVDK RKGKEEVRRL LLSNYNSGAA AAAAVEDETV  180
TVALHIGLPS PSASELASVL SSSSEITDKD GDGDDSGYPF NRLNKGQYWI PTPSQILIGP  240
TQFSCPVCCK TFNRYNNMQM HMWGHGSQYR KGPESLRGTQ PTGMLRLPCY CCAPGCRNNI  300
DHPRAKPLKD FRTLQTHYKR KHGIKPFMCR KCGKAFAVRG DWRTHEKNCG RLWYCICGSD  360
FKHKRSLKDH IKAFGNGHAA YGIDGLEEDD DPASEVEQDN DSMH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57670.1	1e-133	C2H2 family protein