PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743367.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 492aa    MW: 54331.8 Da    PI: 6.2487
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2552e-17159208155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta+ Aa+a+++a+ k++g
  XP_022743367.1 159 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 208
                     78*******************......55************************997 PP

2AP2431.1e-13251301155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a++k +g
  XP_022743367.1 251 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAALKCNG 301
                     89********.7******5553..2.26**********99**********99876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MLDLNLSVTS VGDVSVEMAG ENHDIYGYNN NNRMESSGSF DSSIVHADTT TTTGDDGSSS  60
NAAGTDAFAY SFGILKAAQD EEPENNNTTI PLFPVNVEGD GGKSTGLSQK EWLDLGGSLE  120
ASEHGGGGAE ERIVAQQEQQ VQLRQQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC  180
GKQVYLGGFD TAQAAARAYD RAAIKFRGVD ADINFNVSDY EDDIKQMRNF TKEEFVHILR  240
RQSTGFSRGS SKYRGVTLHK CGRWEARMGQ FLGKKYIYLG LFDSEIEAAR AYDKAALKCN  300
GREAVTNFEP STYEGELISE SENGDQNQGL DLNLGIAPPF TSDPQRVNDN SRNFAFQHVW  360
DGLPLERGAR IENSAPAIMR VQPSPGQAMA FKHVPNWNGS NPTSFPHYRE RATEKRIEVD  420
SSTNWAWQIQ GPYVGANPLP LFPTAASSGF SSSTITSPSA AAGQLRLPST TFLHHYPPVI  480
TNPNISHFYC RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.31e-106AP2 family protein