PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022743367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | AP2 | ||||||||
Protein Properties | Length: 492aa MW: 54331.8 Da PI: 6.2487 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55 | 2e-17 | 159 | 208 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta+ Aa+a+++a+ k++g XP_022743367.1 159 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAQAAARAYDRAAIKFRG 208 78*******************......55************************997 PP | |||||||
2 | AP2 | 43 | 1.1e-13 | 251 | 301 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+++ eAa+a+++a++k +g XP_022743367.1 251 SKYRGVTLHK-CGRWEARMGQF--L-GKKYIYLGLFDSEIEAARAYDKAALKCNG 301 89********.7******5553..2.26**********99**********99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence |
MLDLNLSVTS VGDVSVEMAG ENHDIYGYNN NNRMESSGSF DSSIVHADTT TTTGDDGSSS 60 NAAGTDAFAY SFGILKAAQD EEPENNNTTI PLFPVNVEGD GGKSTGLSQK EWLDLGGSLE 120 ASEHGGGGAE ERIVAQQEQQ VQLRQQVKKS RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC 180 GKQVYLGGFD TAQAAARAYD RAAIKFRGVD ADINFNVSDY EDDIKQMRNF TKEEFVHILR 240 RQSTGFSRGS SKYRGVTLHK CGRWEARMGQ FLGKKYIYLG LFDSEIEAAR AYDKAALKCN 300 GREAVTNFEP STYEGELISE SENGDQNQGL DLNLGIAPPF TSDPQRVNDN SRNFAFQHVW 360 DGLPLERGAR IENSAPAIMR VQPSPGQAMA FKHVPNWNGS NPTSFPHYRE RATEKRIEVD 420 SSTNWAWQIQ GPYVGANPLP LFPTAASSGF SSSTITSPSA AAGQLRLPST TFLHHYPPVI 480 TNPNISHFYC RS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28550.3 | 1e-106 | AP2 family protein |