PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022743365.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 233aa MW: 27462.1 Da PI: 7.3019 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 84.8 | 5e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien++ rqvtfskRr+g+lKK +ELSvLCda++ +iifsstgk+ y+s XP_022743365.1 9 KRIENQTTRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSTGKMCQYCS 59 79***********************************************96 PP | |||||||
2 | K-box | 80.5 | 4.1e-27 | 71 | 170 | 1 | 99 |
K-box 1 yqkssgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaL 94 yqk sg++ e+ ++e+l++ela L+ke++ Lq ++Rh+ Ged++s+ ++ L qLeq+Le+sl+k+R++Knell +q+++l++ke+ l+e+n ++ XP_022743365.1 71 YQKVSGTRiPEHDNWEHLYNELAVLRKETRRLQLSLRHYTGEDMSSIPFEGLDQLEQELEHSLTKVRERKNELLQQQLDNLRRKERILEEDNSNM 165 78889999889999******************************************************************************998 PP K-box 95 rkkle 99 + ++ XP_022743365.1 166 YRWIQ 170 87666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MGRGKIPIKR IENQTTRQVT FSKRRAGLLK KTHELSVLCD AQIGLIIFSS TGKMCQYCSE 60 PYRMEQIIER YQKVSGTRIP EHDNWEHLYN ELAVLRKETR RLQLSLRHYT GEDMSSIPFE 120 GLDQLEQELE HSLTKVRERK NELLQQQLDN LRRKERILEE DNSNMYRWIQ EHRAAIEYQQ 180 GGLEAKAVEH QQVLDQFPFY GEPSSVLQLA TIPQHFHSYQ LQLAQPNLQD SNV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G23260.2 | 2e-98 | MIKC_MADS family protein |