PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022743261.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 492aa MW: 53479.7 Da PI: 9.6324 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 3e-05 | 63 | 85 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_022743261.1 63 FICEICNKGFQRDQNLQLHRRGH 85 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.8 | 0.00036 | 139 | 161 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ XP_022743261.1 139 WKCEKCSKKYAVQSDWKAHSKTC 161 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 492 aa Download sequence |
MSGDMFSMPA SIGGFVEDQN NANPNPKSNP NPVKKKRNLP GTPDPDAEVI ALSPKTLMAT 60 NRFICEICNK GFQRDQNLQL HRRGHNLPWK LRQRTNKEVR KKVYICPEKT CVHHDPSRAL 120 GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF 180 ITHRAFCDAL AEESARFTSV AAANLNFRND NVNLPHGFAG RGVQDVAGIP QFGSGFAQDF 240 SGTPSAVLPE MVQMASGDLF GSSSLNNFGS QGHFPGFNKS GATSTNSNLS SSPLPQGLKE 300 EGGKKGDLME SLSSLYSDTQ NKQSKPAAPM SATALLQKAA QMGSTRSNPS FFGNSFGVTN 360 SSSSHTASLS TTQNRNDQLH QVYPDVKQQE NFMASSSVSM SADAGLGSSN LNSMTSATSN 420 NLDQLMLQTG AKQSDPSQLK MHPSSNSIDR SLTRDFLGMG NDQSSRPFLP QELAKFASIG 480 STMDLSQFTS SH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 90 | 102 | KLRQRTNKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03150.1 | 1e-128 | C2H2 family protein |