PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743261.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 492aa    MW: 53479.7 Da    PI: 9.6324
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.23e-056385123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C++C+k F r  nL+ H r H
  XP_022743261.1 63 FICEICNKGFQRDQNLQLHRRGH 85
                    89*******************88 PP

2zf-C2H212.80.00036139161123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k +  +s+ k H +t+
  XP_022743261.1 139 WKCEKCSKKYAVQSDWKAHSKTC 161
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 492 aa     Download sequence    
MSGDMFSMPA SIGGFVEDQN NANPNPKSNP NPVKKKRNLP GTPDPDAEVI ALSPKTLMAT  60
NRFICEICNK GFQRDQNLQL HRRGHNLPWK LRQRTNKEVR KKVYICPEKT CVHHDPSRAL  120
GDLTGIKKHY SRKHGEKKWK CEKCSKKYAV QSDWKAHSKT CGTREYKCDC GTLFSRKDSF  180
ITHRAFCDAL AEESARFTSV AAANLNFRND NVNLPHGFAG RGVQDVAGIP QFGSGFAQDF  240
SGTPSAVLPE MVQMASGDLF GSSSLNNFGS QGHFPGFNKS GATSTNSNLS SSPLPQGLKE  300
EGGKKGDLME SLSSLYSDTQ NKQSKPAAPM SATALLQKAA QMGSTRSNPS FFGNSFGVTN  360
SSSSHTASLS TTQNRNDQLH QVYPDVKQQE NFMASSSVSM SADAGLGSSN LNSMTSATSN  420
NLDQLMLQTG AKQSDPSQLK MHPSSNSIDR SLTRDFLGMG NDQSSRPFLP QELAKFASIG  480
STMDLSQFTS SH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
190102KLRQRTNKEVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03150.11e-128C2H2 family protein