PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022743076.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 710aa MW: 76365.2 Da PI: 6.7194 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 50.7 | 3.2e-16 | 467 | 513 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_022743076.1 467 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 513 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 710 aa Download sequence |
MPLSELYRKA RGKRDSSQDK NPSCSTGLSF VPENDFVELV WENGQISIQG QSSRSRKIPA 60 CNSLPSHCLP SHTPKSRDKD TGNGGTNSKM GKFVAMDSVL SEIPMSVPSG EMGMNQDDEV 120 VPWLNYPGDQ SLQNECSDFL PELSRVTANE TPTHSNFASF DRRSQSIRDF STASINDGAG 180 FEQGNLSKVP RLADGEAGPR TATAQLCMLP SQVCQTSLSY FRSRILENIG NSLGHTSTHH 240 GICGDSMGVQ TSDGGLPGNK RQKQDPTPPC NNTVLMNFSH FSRPAALVKA SLQNIGAMAS 300 IGSKEKGSAA SICNPADTML IDSNIELQEE KFSRCQPTMV PVKTDVIQSE AKSLDEMVAA 360 EPTDAICEEN VLKNDKNPSQ VIGESASKGL LGGDNAVESV FAASSVCSGN IVERASDNPV 420 NNLKRKNHDN EESECPSEDA EEESVGVKKA VPARGGVGSK RSRAAEVHNL SERRRRDRIN 480 EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVLFMS MGAGLYMPPM MLPTGMLHMH 540 GAHMAHFSPM GVGMGFGMPL PDMNTGSSTC PMVQVPPICG TPFSDPGPHM SGPTALHGMA 600 GSNVHLFGLH GQGFPMSMPR GPLIPISGGH LMKSTMGACG LVGPMDNMYS ARATSSKDPL 660 QNINSQAVRN TNMNSSMNQT PTQVALRLYF SSEAKDKLAI SHVPNNKSKF |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 15 | RKARGKRD |
2 | 257 | 264 | PGNKRQKQ |
3 | 472 | 477 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09530.2 | 3e-71 | bHLH family protein |