PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022743074.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 725aa MW: 77921.7 Da PI: 6.2381

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022743074.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	50.7	3.3e-16	467	513	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K++Ka++L +A+eY+k Lq XP_022743074.1 467 VHNLSERRRRDRINEKMRALQELIPNC-----NKVDKASMLDEAIEYLKTLQ 513 6***********************8.....6****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MPLSELYRKA RGKRDSSQDK NPSCSTGLSF VPENDFVELV WENGQISIQG QSSRSRKIPA 60 CNSLPSHCLP SHTPKSRDKD TGNGGTNSKM GKFVAMDSVL SEIPMSVPSG EMGMNQDDEV 120 VPWLNYPGDQ SLQNECSDFL PELSRVTANE TPTHSNFASF DRRSQSIRDF STASINDGAG 180 FEQGNLSKVP RLADGEAGPR TATAQLCMLP SQVCQTSLSY FRSRILENIG NSLGHTSTHH 240 GICGDSMGVQ TSDGGLPGNK RQKQDPTPPC NNTVLMNFSH FSRPAALVKA SLQNIGAMAS 300 IGSKEKGSAA SICNPADTML IDSNIELQEE KFSRCQPTMV PVKTDVIQSE AKSLDEMVAA 360 EPTDAICEEN VLKNDKNPSQ VIGESASKGL LGGDNAVESV FAASSVCSGN IVERASDNPV 420 NNLKRKNHDN EESECPSEDA EEESVGVKKA VPARGGVGSK RSRAAEVHNL SERRRRDRIN 480 EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVLFMS MGAGLYMPPM MLPTGMLHMH 540 GAHMAHFSPM GVGMGFGMPL PDMNTGSSTC PMVQVPPICG TPFSDPGPHM SGPTALHGMA 600 GSNVHLFGLH GQGFPMSMPR GPLIPISGGH LMKSTMGACG LVGPMDNMYS ARATSSKDPL 660 QNINSQAVRN TNMNSSMNQT PTQCPTTNQS FEQPNAVREN VQSSEITGSV PFRSADGNEK 720 LPDRL

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MPLSELYRKA RGKRDSSQDK NPSCSTGLSF VPENDFVELV WENGQISIQG QSSRSRKIPA  60
CNSLPSHCLP SHTPKSRDKD TGNGGTNSKM GKFVAMDSVL SEIPMSVPSG EMGMNQDDEV  120
VPWLNYPGDQ SLQNECSDFL PELSRVTANE TPTHSNFASF DRRSQSIRDF STASINDGAG  180
FEQGNLSKVP RLADGEAGPR TATAQLCMLP SQVCQTSLSY FRSRILENIG NSLGHTSTHH  240
GICGDSMGVQ TSDGGLPGNK RQKQDPTPPC NNTVLMNFSH FSRPAALVKA SLQNIGAMAS  300
IGSKEKGSAA SICNPADTML IDSNIELQEE KFSRCQPTMV PVKTDVIQSE AKSLDEMVAA  360
EPTDAICEEN VLKNDKNPSQ VIGESASKGL LGGDNAVESV FAASSVCSGN IVERASDNPV  420
NNLKRKNHDN EESECPSEDA EEESVGVKKA VPARGGVGSK RSRAAEVHNL SERRRRDRIN  480
EKMRALQELI PNCNKVDKAS MLDEAIEYLK TLQLQVLFMS MGAGLYMPPM MLPTGMLHMH  540
GAHMAHFSPM GVGMGFGMPL PDMNTGSSTC PMVQVPPICG TPFSDPGPHM SGPTALHGMA  600
GSNVHLFGLH GQGFPMSMPR GPLIPISGGH LMKSTMGACG LVGPMDNMYS ARATSSKDPL  660
QNINSQAVRN TNMNSSMNQT PTQCPTTNQS FEQPNAVREN VQSSEITGSV PFRSADGNEK  720
LPDRL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	8	15	RKARGKRD
2	257	264	PGNKRQKQ
3	472	477	ERRRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09530.2	8e-71	bHLH family protein