PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022743050.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 227aa MW: 25910.9 Da PI: 4.8109 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.7 | 1.6e-19 | 93 | 142 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+++AeIrd + ng r++lg+f+tae Aa a+++a+++l+g XP_022743050.1 93 YRGVRKRP-WGKYAAEIRDSTRNG--VRVWLGTFDTAEAAALAYDQAALALRG 142 9*******.**********44465..*************************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 227 aa Download sequence |
MDSSFFRYPN LQFSPESSSS YVSQENLSPE SFNFLHNQAL LFNENDSKEK LLWGALNQAP 60 VNSFDTTSAN SFIDEHEVNS KANEEETEKK VSYRGVRKRP WGKYAAEIRD STRNGVRVWL 120 GTFDTAEAAA LAYDQAALAL RGPMAILNFP VDKVYESLHE MNYGFEEGCS PVLTMKKRFS 180 MKSRRSENKK IKNQKEMGME NILVLEDLGA DYLEELLSIS ESPTPYW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G23240.1 | 2e-51 | ERF family protein |