PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743046.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 391aa    MW: 43909 Da    PI: 5.1859
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.57.6e-06730126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  ++r G C++  +C+FaHg
  XP_022743046.1  7 FKTKLCVLYQR-GRCSR-QSCSFAHG 30
                    69*********.*****.*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    
MAERKLFKTK LCVLYQRGRC SRQSCSFAHG DAELRHFAAS YGGYSPLRSI NKKRNHKKER  60
VDGQSDFSEN LTFSNEIEDL VIEGRNISPT PKSILEDQLK KVCLDVNMLT DDKHELEIFV  120
EEKVQEADTL TSQIEELDSQ LEKEKEECKR ITSRIKKFVK AYNRCSQIED ELERSQARLQ  180
KLGEQLGLNI SGTSGDEENS NINIVSDGET NGAHMSYPQN ERRGNSSPSK KRLCPNQDIT  240
EMPIRYGKGC KMETIRMGKR SRWSEHPTQS NIDKENGSLN NGNSSAVHLP SNEKLRKGKK  300
VSVSTSTADK LKSAHAGVSL PSTSMAAHAV DDDEVLEIEE EENVEVSGLP FLLPLPPPII  360
PNGYSQYEGN DQNIDIDIDG PEEEMAHVDI L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.12e-56C3H family protein