PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743039.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 397aa    MW: 44469.7 Da    PI: 5.1858
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.47.7e-06730126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  ++r G C++  +C+FaHg
  XP_022743039.1  7 FKTKLCVLYQR-GRCSR-QSCSFAHG 30
                    69*********.*****.*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MAERKLFKTK LCVLYQRGRC SRQSCSFAHG DAELRHFAAS YGGYSPLRSI NKKSLCLSGR  60
NHKKERVDGQ SDFSENLTFS NEIEDLVIEG RNISPTPKSI LEDQLKKVCL DVNMLTDDKH  120
ELEIFVEEKV QEADTLTSQI EELDSQLEKE KEECKRITSR IKKFVKAYNR CSQIEDELER  180
SQARLQKLGE QLGLNISGTS GDEENSNINI VSDGETNGAH MSYPQNERRG NSSPSKKRLC  240
PNQDITEMPI RYGKGCKMET IRMGKRSRWS EHPTQSNIDK ENGSLNNGNS SAVHLPSNEK  300
LRKGKKVSVS TSTADKLKSA HAGVSLPSTS MAAHAVDDDE VLEIEEEENV EVSGLPFLLP  360
LPPPIIPNGY SQYEGNDQNI DIDIDGPEEE MAHVDIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.12e-57C3H family protein