PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022743021.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 428aa    MW: 48346.9 Da    PI: 6.2592
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022743021.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.38.5e-06730126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  ++r G C++  +C+FaHg
  XP_022743021.1  7 FKTKLCVLYQR-GRCSR-QSCSFAHG 30
                    69*********.*****.*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    
MAERKLFKTK LCVLYQRGRC SRQSCSFAHG DAELRHFAAS YGGKRNHRDG DLRDKLDQRL  60
SPERRYSPGR DSRHGRIVRG YSPLRSINKK RNHKKERVDG QSDFSENLTF SNEIEDLVIE  120
GRNISPTPKS ILEDQLKKVC LDVNMLTDDK HELEIFVEEK VQEADTLTSQ IEELDSQLEK  180
EKEECKRITS RIKKFVKAYN RCSQIEDELE RSQARLQKLG EQLGLNISGT SGDEENSNIN  240
IVSDGETNGA HMSYPQNERR GNSSPSKKRL CPNQDITEMP IRYGKGCKME TIRMGKRSRW  300
SEHPTQSNID KENGSLNNGN SSAVHLPSNE KLRKGKKVSV STSTADKLKS AHAGVSLPST  360
SMAAHAVDDD EVLEIEEEEN VEVSGLPFLL PLPPPIIPNG YSQYEGNDQN IDIDIDGPEE  420
EMAHVDIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.17e-69C3H family protein