PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022742985.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 434aa    MW: 48907.6 Da    PI: 6.2585
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022742985.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH17.38.6e-06730126
                    --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHg 26
                    +kt+lC  ++r G C++  +C+FaHg
  XP_022742985.1  7 FKTKLCVLYQR-GRCSR-QSCSFAHG 30
                    69*********.*****.*******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MAERKLFKTK LCVLYQRGRC SRQSCSFAHG DAELRHFAAS YGGKRNHRDG DLRDKLDQRL  60
SPERRYSPGR DSRHGRIVRG YSPLRSINKK SLCLSGRNHK KERVDGQSDF SENLTFSNEI  120
EDLVIEGRNI SPTPKSILED QLKKVCLDVN MLTDDKHELE IFVEEKVQEA DTLTSQIEEL  180
DSQLEKEKEE CKRITSRIKK FVKAYNRCSQ IEDELERSQA RLQKLGEQLG LNISGTSGDE  240
ENSNINIVSD GETNGAHMSY PQNERRGNSS PSKKRLCPNQ DITEMPIRYG KGCKMETIRM  300
GKRSRWSEHP TQSNIDKENG SLNNGNSSAV HLPSNEKLRK GKKVSVSTST ADKLKSAHAG  360
VSLPSTSMAA HAVDDDEVLE IEEEENVEVS GLPFLLPLPP PIIPNGYSQY EGNDQNIDID  420
IDGPEEEMAH VDIL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21810.12e-67C3H family protein