PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022742969.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 381aa MW: 41966.8 Da PI: 7.3292 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.2 | 1.7e-17 | 118 | 163 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ XP_022742969.1 118 RGHWREAEDAKLKELVAQHGPQNWNLIAEHLE-GRSGKSCRLRWFNQ 163 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.7 | 2.7e-18 | 170 | 213 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ XP_022742969.1 170 KKAFTEEEEERLLAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 213 679*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 381 aa Download sequence |
MSLQNLKNDF NCYSGVVQEM KFLAPPAIFP HSTERDTTLS HMGFQISSSL MEQSNKCLTF 60 EPLESRVTTR AVASDGKDGF LDVEKKVLSL NFGGEEERNK NSCCTGGSKN GHTKLCARGH 120 WREAEDAKLK ELVAQHGPQN WNLIAEHLEG RSGKSCRLRW FNQLDPRINK KAFTEEEEER 180 LLAAHRLYGN KWAMIARLFP GRTDNAVKNH WHVIMARKHR EESSIYRRRK PSSSATQAGL 240 DVTVQNNACS DQSTISSNID ESASTCTDLS LTPLSAKVPP GFFSSFSPVH QMGSVGEKVV 300 TRGNGDFDKF FGTGNVFYQQ GPMGVVTGVD ESAQSSDSNS EVSATESVAT NRTNHSMSGE 360 SANGNQKINM PFIDFLGVGA S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17800.1 | 4e-70 | MYB family protein |