PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742882.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 399aa MW: 44169.6 Da PI: 8.3837

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.6	7.8e-19	102	188	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L++a+ e+ ++l+rg+l++ +Weev++++ r ++ ++s +qCk+k +nl+kryk +k++++++ ++s++p+f+++e XP_022742882.1 102 EWSDAAIGCLLQAYMERLTQLNRGNLRGRDWEEVAAAVseRCEKQSKSVEQCKNKVDNLKKRYKLEKHRMSDG-GITVSHWPWFKKME 188 5***********************************777778899*********************9.55667******8 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MASSVDDDFS LLDHHQTNPN HHHVLHHHPS YTQIHAPPPG NHEGDDDSDS AFPGANFGNN 60 NNNNATSSDV RIEKRKDQEE INDGVLKRPK QSTTENRKDR EEWSDAAIGC LLQAYMERLT 120 QLNRGNLRGR DWEEVAAAVS ERCEKQSKSV EQCKNKVDNL KKRYKLEKHR MSDGGITVSH 180 WPWFKKMEEI VGNSLPVKAV ADDDKDGSSP GTAVRQSKSR YASATPSPVG QIISMKSKSP 240 KWRRVVFKIS GAALACTGPH NIDPKVAVLI AREVSIACHH GVEVAIVVGG RNFFCGDTWV 300 TATGLDRTTA YQIGMMASVM NSILLQSSLE KMGIQTRVQT AFSVQEVAEP YNRQRAIRHL 360 EKGRVVIFGG IGTGNPLFST DTAAAIRASE NTFFLVLYI

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MASSVDDDFS LLDHHQTNPN HHHVLHHHPS YTQIHAPPPG NHEGDDDSDS AFPGANFGNN  60
NNNNATSSDV RIEKRKDQEE INDGVLKRPK QSTTENRKDR EEWSDAAIGC LLQAYMERLT  120
QLNRGNLRGR DWEEVAAAVS ERCEKQSKSV EQCKNKVDNL KKRYKLEKHR MSDGGITVSH  180
WPWFKKMEEI VGNSLPVKAV ADDDKDGSSP GTAVRQSKSR YASATPSPVG QIISMKSKSP  240
KWRRVVFKIS GAALACTGPH NIDPKVAVLI AREVSIACHH GVEVAIVVGG RNFFCGDTWV  300
TATGLDRTTA YQIGMMASVM NSILLQSSLE KMGIQTRVQT AFSVQEVAEP YNRQRAIRHL  360
EKGRVVIFGG IGTGNPLFST DTAAAIRASE NTFFLVLYI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.2	1e-167	Trihelix family protein