PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742617.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 958aa MW: 107775 Da PI: 5.1331

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742617.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.6e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_022742617.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_022742617.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 958 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR RRKRKGIDYN GEIPFEKRPP PGFYDVADED RPVEQPKFPT 240 TIEELEGKRR VDIEAQLRKQ DIAKNKIAQR QDAPSAILQA NKMNDPETVR KRSKLMLPEP 300 QISNHELEEI AKMGYASDLL AGNEELAEGS GATRALLANY SQTPRQGMTP LRTPQRTPAG 360 KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP RNQIQTPNPM STPSATPGGT 420 GLTPRIGMTP SRDGYSFGLT PKGTPIRDEL HINEDMDLHD SGKLEQLRRA DLRRNLRSGL 480 SSLPQPKNEY QIVVQPPPED NEEPEEKIEE DMSDRIARER AEEEARQQAL LKKRSKVLQR 540 ELPRPPSASL ELIRDSLIRT DVDKSSFVPP TSIEQADEMV RKELLSLLEH DNAKYPLDEK 600 AKGKKKGAKR TANGSIPSIE DFEEDEMTEA DSLIKEEAEF LRVAMGHENE SLDDFVEAHN 660 TCLNDLMYFP TRNAYGLSSV AGNTEKLAAL HTEFDNVKKK MDIDKSKAEG MEKKFNVLTQ 720 GYERRAATLW RQIESTFNQM DTAGTELECF QALQKQEQLA ASHRINGLWE EVQKQKELEQ 780 TLQRRYGNLI AELERIQNLM NIYKVQAQKQ EAVAEKDRNL ELSEAAASQS AVPSTGLSEP 840 APSSEHVDSS LDGHLSLKVD MNVDSGKEHA AMDMESDGSM CGNVTLVVED KGDNITKRLD 900 GMSGDAVTSS EVAAESINPA QESIQQQLEG EGFNDHTKID NSSVLGGDTA EKQTGIEE

Sequence ? help Back to Top

Protein Sequence Length: 958 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRQR RRKRKGIDYN GEIPFEKRPP PGFYDVADED RPVEQPKFPT  240
TIEELEGKRR VDIEAQLRKQ DIAKNKIAQR QDAPSAILQA NKMNDPETVR KRSKLMLPEP  300
QISNHELEEI AKMGYASDLL AGNEELAEGS GATRALLANY SQTPRQGMTP LRTPQRTPAG  360
KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP RNQIQTPNPM STPSATPGGT  420
GLTPRIGMTP SRDGYSFGLT PKGTPIRDEL HINEDMDLHD SGKLEQLRRA DLRRNLRSGL  480
SSLPQPKNEY QIVVQPPPED NEEPEEKIEE DMSDRIARER AEEEARQQAL LKKRSKVLQR  540
ELPRPPSASL ELIRDSLIRT DVDKSSFVPP TSIEQADEMV RKELLSLLEH DNAKYPLDEK  600
AKGKKKGAKR TANGSIPSIE DFEEDEMTEA DSLIKEEAEF LRVAMGHENE SLDDFVEAHN  660
TCLNDLMYFP TRNAYGLSSV AGNTEKLAAL HTEFDNVKKK MDIDKSKAEG MEKKFNVLTQ  720
GYERRAATLW RQIESTFNQM DTAGTELECF QALQKQEQLA ASHRINGLWE EVQKQKELEQ  780
TLQRRYGNLI AELERIQNLM NIYKVQAQKQ EAVAEKDRNL ELSEAAASQS AVPSTGLSEP  840
APSSEHVDSS LDGHLSLKVD MNVDSGKEHA AMDMESDGSM CGNVTLVVED KGDNITKRLD  900
GMSGDAVTSS EVAAESINPA QESIQQQLEG EGFNDHTKID NSSVLGGDTA EKQTGIEE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRQRRRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein