PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742304.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1517aa MW: 168279 Da PI: 7.0328

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742304.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00086	1485	1511	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022742304.1 1485 YQCKveGCGLSFRFVSDFSRHRRKtgH 1511 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1517 aa Download sequence
MSRFSSCFKR FPRSLSKCPE LGSGVDVSKN IGSVSSCGDS GGDGRAVFTT RHQELGQSGK 60 GIKGLVSSPQ CGVQKQVWQS GEIYTLEQFE SKSKTFAKSL LGVLKEVSPL DIEALFWKVA 120 SEKPIFLEYA NDVPGSGFGE PEGQFQYFHR RRRRRRKRMS YRRESSDCKK DEIDTVKNSH 180 IDEIKNTSDK SDPDTCLETP TSSTPLSTLA SDGNSHSKRK SGNASNDMEG TAGWKLSNSP 240 WNLQVIARSA GSLTRFMPDD IPGVTSPMIY IGMLFSWFAW HVEDHELHSM NFLHIGSSKT 300 WYAVPGDYAF AFEEVIRTEA YGGNIDRLAV LSLLGEKTTL LSPELIVASG IPCCRLIQNP 360 GEFVVTFPRA YHVGFSHGFN CGEAANFGTP QWLQVAKEAA VRRAAMNYLP MLSHQQLLYL 420 LTMSFVSRVP RSFLPGARSS RLRDRQKEER ELLVKKAFIE DLLTENKFLS LLKRGSTCRA 480 IIWAPDLLPC TSKDSEFPSG SATVSTVLQE NVSDIHCENK TNQNNLLEEM SLYMENLNYL 540 YLNDDDLTCD FQVDSGTLAC VACGILGYPF MSVVQPSEEA TIQPLPADHL LVQGCPTVLE 600 PKNAQSCPGL DHPIESSVSD NVNHVADLSL PSKDGPSPSI TKFSEGWDTT NKYLRPRIFC 660 LEHAVQVEEL LQSKGGAKML VICHSDYLKI KPHAKHVAED IGFPVNYTDI PLDAASQEDL 720 NLISFAIDNE NDEIGEDWTS KLGVNLRYCV KVRKNSAFKQ VQHVLPLSGL FADKYGSSEL 780 LNIRWKSRKS RSKGKLNHPS PSKPRGSVEM KVDEILVEKL DGNITKKEQK IIQYSRKKKR 840 KPVYSTGVGQ DLELFKDDLP REDSSAIYGL LDELGGNKSK INAKSASARS CHTQLEIQTT 900 SVVGVVQKDH SKILELSDLD GEACSLTACA SSQKQCEIKL MERTSENNEI SPADKCSKCC 960 VVAAAERFVE NAATFSDVCN PVSEGQGEEL AVRYDLINLA NSASSHFAQP SAGRFDPGFE 1020 DIIFEKSCIN GRVCTHMTSD NRAQQETEAI SRNNNDGNLC DNKLINKPIL GSEDFSSGVS 1080 LGKEVQHETN TSRGSQVEPF LSSPIPTKRP STVPAGNKSE IPKDPAAADS RDGTISKNKA 1140 RNQEIHSSKE GLLSGSTTPV GIDQPTGLLV EKYSVISENP CAIEDLHTDV TLDVEVLQEM 1200 QATNRTCGDE VIACSHLPIK EKQPTPTVME ACSEVQRESS LQKKLCADAT VDDRHENDLI 1260 RNEQNQDESV SCCVTPINQT TIPIQKYSRA RRESCATVNE NDGGEVCSLV ENRNLESAEA 1320 NCRSSALNGI KRKREVEEAP EKKLGGNGFI RSPCEGLRPR AQKDATSGIN VGKTSQEVVP 1380 TKETRKPSIH TQSKKIIKKG SHRCDLEGCH MSFETKEELR LHKHNRCPYE GCGKKFRSHK 1440 YAILHQRVHE DDRPLKCPWK GCSMSFKWAW ARTEHIRVHT GERPYQCKVE GCGLSFRFVS 1500 DFSRHRRKTG HYIDSSV

Sequence ? help Back to Top

Protein Sequence Length: 1517 aa Download sequence

MSRFSSCFKR FPRSLSKCPE LGSGVDVSKN IGSVSSCGDS GGDGRAVFTT RHQELGQSGK  60
GIKGLVSSPQ CGVQKQVWQS GEIYTLEQFE SKSKTFAKSL LGVLKEVSPL DIEALFWKVA  120
SEKPIFLEYA NDVPGSGFGE PEGQFQYFHR RRRRRRKRMS YRRESSDCKK DEIDTVKNSH  180
IDEIKNTSDK SDPDTCLETP TSSTPLSTLA SDGNSHSKRK SGNASNDMEG TAGWKLSNSP  240
WNLQVIARSA GSLTRFMPDD IPGVTSPMIY IGMLFSWFAW HVEDHELHSM NFLHIGSSKT  300
WYAVPGDYAF AFEEVIRTEA YGGNIDRLAV LSLLGEKTTL LSPELIVASG IPCCRLIQNP  360
GEFVVTFPRA YHVGFSHGFN CGEAANFGTP QWLQVAKEAA VRRAAMNYLP MLSHQQLLYL  420
LTMSFVSRVP RSFLPGARSS RLRDRQKEER ELLVKKAFIE DLLTENKFLS LLKRGSTCRA  480
IIWAPDLLPC TSKDSEFPSG SATVSTVLQE NVSDIHCENK TNQNNLLEEM SLYMENLNYL  540
YLNDDDLTCD FQVDSGTLAC VACGILGYPF MSVVQPSEEA TIQPLPADHL LVQGCPTVLE  600
PKNAQSCPGL DHPIESSVSD NVNHVADLSL PSKDGPSPSI TKFSEGWDTT NKYLRPRIFC  660
LEHAVQVEEL LQSKGGAKML VICHSDYLKI KPHAKHVAED IGFPVNYTDI PLDAASQEDL  720
NLISFAIDNE NDEIGEDWTS KLGVNLRYCV KVRKNSAFKQ VQHVLPLSGL FADKYGSSEL  780
LNIRWKSRKS RSKGKLNHPS PSKPRGSVEM KVDEILVEKL DGNITKKEQK IIQYSRKKKR  840
KPVYSTGVGQ DLELFKDDLP REDSSAIYGL LDELGGNKSK INAKSASARS CHTQLEIQTT  900
SVVGVVQKDH SKILELSDLD GEACSLTACA SSQKQCEIKL MERTSENNEI SPADKCSKCC  960
VVAAAERFVE NAATFSDVCN PVSEGQGEEL AVRYDLINLA NSASSHFAQP SAGRFDPGFE  1020
DIIFEKSCIN GRVCTHMTSD NRAQQETEAI SRNNNDGNLC DNKLINKPIL GSEDFSSGVS  1080
LGKEVQHETN TSRGSQVEPF LSSPIPTKRP STVPAGNKSE IPKDPAAADS RDGTISKNKA  1140
RNQEIHSSKE GLLSGSTTPV GIDQPTGLLV EKYSVISENP CAIEDLHTDV TLDVEVLQEM  1200
QATNRTCGDE VIACSHLPIK EKQPTPTVME ACSEVQRESS LQKKLCADAT VDDRHENDLI  1260
RNEQNQDESV SCCVTPINQT TIPIQKYSRA RRESCATVNE NDGGEVCSLV ENRNLESAEA  1320
NCRSSALNGI KRKREVEEAP EKKLGGNGFI RSPCEGLRPR AQKDATSGIN VGKTSQEVVP  1380
TKETRKPSIH TQSKKIIKKG SHRCDLEGCH MSFETKEELR LHKHNRCPYE GCGKKFRSHK  1440
YAILHQRVHE DDRPLKCPWK GCSMSFKWAW ARTEHIRVHT GERPYQCKVE GCGLSFRFVS  1500
DFSRHRRKTG HYIDSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	155	RRRRRR
2	150	156	RRRRRRR
3	150	158	RRRRRRRKR
4	151	156	RRRRRR
5	151	158	RRRRRRKR
6	151	157	RRRRRRR
7	151	159	RRRRRRRKR
8	152	158	RRRRRRR
9	837	842	KKKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein