PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022742303.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1570aa MW: 174060 Da PI: 6.9866

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022742303.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	1538	1564	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg sF+ s++ rH r+ H XP_022742303.1 1538 YQCKveGCGLSFRFVSDFSRHRRKtgH 1564 99*********************9777 PP

Sequence ? help Back to Top
Protein Sequence Length: 1570 aa Download sequence
MGNVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA GAYGICKIIP PLPKPSKKYV 60 FNNLNRSLSK CPELGSGVDV SKNIGSVSSC GDSGGDGRAV FTTRHQELGQ SGKGIKGLVS 120 SPQCGVQKQV WQSGEIYTLE QFESKSKTFA KSLLGVLKEV SPLDIEALFW KVASEKPIFL 180 EYANDVPGSG FGEPEGQFQY FHRRRRRRRK RMSYRRESSD CKKDEIDTVK NSHIDEIKNT 240 SDKSDPDTCL ETPTSSTPLS TLASDGNSHS KRKSGNASND MEGTAGWKLS NSPWNLQVIA 300 RSAGSLTRFM PDDIPGVTSP MIYIGMLFSW FAWHVEDHEL HSMNFLHIGS SKTWYAVPGD 360 YAFAFEEVIR TEAYGGNIDR LAVLSLLGEK TTLLSPELIV ASGIPCCRLI QNPGEFVVTF 420 PRAYHVGFSH GFNCGEAANF GTPQWLQVAK EAAVRRAAMN YLPMLSHQQL LYLLTMSFVS 480 RVPRSFLPGA RSSRLRDRQK EERELLVKKA FIEDLLTENK FLSLLKRGST CRAIIWAPDL 540 LPCTSKDSEF PSGSATVSTV LQENVSDIHC ENKTNQNNLL EEMSLYMENL NYLYLNDDDL 600 TCDFQVDSGT LACVACGILG YPFMSVVQPS EEATIQPLPA DHLLVQGCPT VLEPKNAQSC 660 PGLDHPIESS VSDNVNHVAD LSLPSKDGPS PSITKFSEGW DTTNKYLRPR IFCLEHAVQV 720 EELLQSKGGA KMLVICHSDY LKIKPHAKHV AEDIGFPVNY TDIPLDAASQ EDLNLISFAI 780 DNENDEIGED WTSKLGVNLR YCVKVRKNSA FKQVQHVLPL SGLFADKYGS SELLNIRWKS 840 RKSRSKGKLN HPSPSKPRGS VEMKVDEILV EKLDGNITKK EQKIIQYSRK KKRKPVYSTG 900 VGQDLELFKD DLPREDSSAI YGLLDELGGN KSKINAKSAS ARSCHTQLEI QTTSVVGVVQ 960 KDHSKILELS DLDGEACSLT ACASSQKQCE IKLMERTSEN NEISPADKCS KCCVVAAAER 1020 FVENAATFSD VCNPVSEGQG EELAVRYDLI NLANSASSHF AQPSAGRFDP GFEDIIFEKS 1080 CINGRVCTHM TSDNRAQQET EAISRNNNDG NLCDNKLINK PILGSEDFSS GVSLGKEVQH 1140 ETNTSRGSQV EPFLSSPIPT KRPSTVPAGN KSEIPKDPAA ADSRDGTISK NKARNQEIHS 1200 SKEGLLSGST TPVGIDQPTG LLVEKYSVIS ENPCAIEDLH TDVTLDVEVL QEMQATNRTC 1260 GDEVIACSHL PIKEKQPTPT VMEACSEVQR ESSLQKKLCA DATVDDRHEN DLIRNEQNQD 1320 ESVSCCVTPI NQTTIPIQKY SRARRESCAT VNENDGGEVC SLVENRNLES AEANCRSSAL 1380 NGIKRKREVE EAPEKKLGGN GFIRSPCEGL RPRAQKDATS GINVGKTSQE VVPTKETRKP 1440 SIHTQSKKII KKGSHRCDLE GCHMSFETKE ELRLHKHNRC PYEGCGKKFR SHKYAILHQR 1500 VHEDDRPLKC PWKGCSMSFK WAWARTEHIR VHTGERPYQC KVEGCGLSFR FVSDFSRHRR 1560 KTGHYIDSSV

Sequence ? help Back to Top

Protein Sequence Length: 1570 aa Download sequence

MGNVEIPKWL KGLPLAPEFR PTDTEFADPI AYISKIEKEA GAYGICKIIP PLPKPSKKYV  60
FNNLNRSLSK CPELGSGVDV SKNIGSVSSC GDSGGDGRAV FTTRHQELGQ SGKGIKGLVS  120
SPQCGVQKQV WQSGEIYTLE QFESKSKTFA KSLLGVLKEV SPLDIEALFW KVASEKPIFL  180
EYANDVPGSG FGEPEGQFQY FHRRRRRRRK RMSYRRESSD CKKDEIDTVK NSHIDEIKNT  240
SDKSDPDTCL ETPTSSTPLS TLASDGNSHS KRKSGNASND MEGTAGWKLS NSPWNLQVIA  300
RSAGSLTRFM PDDIPGVTSP MIYIGMLFSW FAWHVEDHEL HSMNFLHIGS SKTWYAVPGD  360
YAFAFEEVIR TEAYGGNIDR LAVLSLLGEK TTLLSPELIV ASGIPCCRLI QNPGEFVVTF  420
PRAYHVGFSH GFNCGEAANF GTPQWLQVAK EAAVRRAAMN YLPMLSHQQL LYLLTMSFVS  480
RVPRSFLPGA RSSRLRDRQK EERELLVKKA FIEDLLTENK FLSLLKRGST CRAIIWAPDL  540
LPCTSKDSEF PSGSATVSTV LQENVSDIHC ENKTNQNNLL EEMSLYMENL NYLYLNDDDL  600
TCDFQVDSGT LACVACGILG YPFMSVVQPS EEATIQPLPA DHLLVQGCPT VLEPKNAQSC  660
PGLDHPIESS VSDNVNHVAD LSLPSKDGPS PSITKFSEGW DTTNKYLRPR IFCLEHAVQV  720
EELLQSKGGA KMLVICHSDY LKIKPHAKHV AEDIGFPVNY TDIPLDAASQ EDLNLISFAI  780
DNENDEIGED WTSKLGVNLR YCVKVRKNSA FKQVQHVLPL SGLFADKYGS SELLNIRWKS  840
RKSRSKGKLN HPSPSKPRGS VEMKVDEILV EKLDGNITKK EQKIIQYSRK KKRKPVYSTG  900
VGQDLELFKD DLPREDSSAI YGLLDELGGN KSKINAKSAS ARSCHTQLEI QTTSVVGVVQ  960
KDHSKILELS DLDGEACSLT ACASSQKQCE IKLMERTSEN NEISPADKCS KCCVVAAAER  1020
FVENAATFSD VCNPVSEGQG EELAVRYDLI NLANSASSHF AQPSAGRFDP GFEDIIFEKS  1080
CINGRVCTHM TSDNRAQQET EAISRNNNDG NLCDNKLINK PILGSEDFSS GVSLGKEVQH  1140
ETNTSRGSQV EPFLSSPIPT KRPSTVPAGN KSEIPKDPAA ADSRDGTISK NKARNQEIHS  1200
SKEGLLSGST TPVGIDQPTG LLVEKYSVIS ENPCAIEDLH TDVTLDVEVL QEMQATNRTC  1260
GDEVIACSHL PIKEKQPTPT VMEACSEVQR ESSLQKKLCA DATVDDRHEN DLIRNEQNQD  1320
ESVSCCVTPI NQTTIPIQKY SRARRESCAT VNENDGGEVC SLVENRNLES AEANCRSSAL  1380
NGIKRKREVE EAPEKKLGGN GFIRSPCEGL RPRAQKDATS GINVGKTSQE VVPTKETRKP  1440
SIHTQSKKII KKGSHRCDLE GCHMSFETKE ELRLHKHNRC PYEGCGKKFR SHKYAILHQR  1500
VHEDDRPLKC PWKGCSMSFK WAWARTEHIR VHTGERPYQC KVEGCGLSFR FVSDFSRHRR  1560
KTGHYIDSSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	203	208	RRRRRR
2	203	209	RRRRRRR
3	203	211	RRRRRRRKR
4	204	209	RRRRRR
5	204	211	RRRRRRKR
6	204	210	RRRRRRR
7	204	212	RRRRRRRKR
8	205	211	RRRRRRR
9	890	895	KKKRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04240.1	0.0	C2H2 family protein