PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022742186.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 893aa    MW: 99745 Da    PI: 6.5271
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022742186.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.23e-11551603855
             AP2   8 wdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++++gr++A+++d  s+n+   k+ ++++lg ++++e Aa+ ++ a++k++g
  XP_022742186.1 551 RHRWTGRFEAHLWDkSSWNNiqnKKgRQVYLGAYDSEEAAARTYDLAALKYWG 603
                     799***********777799977447*************************98 PP

2AP254.62.6e-17646697155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV +++ +grW+A+I   +   g +k+ +lg+++t eeAa+a++ a+++++g
  XP_022742186.1 646 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYDTQEEAAAAYDMAALEYRG 697
                     89****99**********99966...3.6*************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 893 aa     Download sequence    
MAASSTFESS LRRGSQTTTT TSRKTTPSSS GSSRRAATAP FRRSRSVSAF SRASHSDFSE  60
FSIKTDNPLF DNNSNDDALF PNSILKSDQI TSKTKHKAVA ADDYGNRRGR SISRVGPDGR  120
HVSGSGNSKE SSRSLSIVDT RRRGRSVSRT PLSRTRFAAS ETEMEQEGNL WMKSRDKGNL  180
SATSGNGSKG NLVRSSSSLT RSSQRKPIDP LDASPKSLSR LKTAKLDGAI STSSFSEDEL  240
MDSFQGDNLV GDATAASDIY RTVKSEVRRA ISDIQNELEN AIRSNATTGV AEIPPDLVNP  300
GAVELVSDIQ REYATKLEQS QERARQLRTD LAVEEYRGME LSRILKEVLP DAKTPSTKKS  360
RSGRKSSIER RKISKCLTED ALAYFDECVS LSTFDGSDFS SLEDPPPKLV GVGNLDGDGI  420
SLLHANSNIP GSNCPSNYLH DKQECQFTYN HDPFDLTASN GCMEQSRDQL SLNSSDGEWN  480
KNFKFSFSSK PGQICELQQD IKKYVKGFEK DKRKIDIDSQ ITSRSSYDPA EYKFQASQQS  540
LLFDHVFLKN RHRWTGRFEA HLWDKSSWNN IQNKKGRQVY LGAYDSEEAA ARTYDLAALK  600
YWGPDTTLNF PIDRYEKEIE EMKKVSKEEY LASLRRRSSG FSRGVSKYRG VARHHHNGRW  660
EARIGRVFGN KYLYLGTYDT QEEAAAAYDM AALEYRGTNA VTNFDVSHYI ERLKQKGISF  720
LDQPQEQIPD TAAEVEQPQQ QQQQQQQEQQ QQQREEAHKP QHFQYMPMHL PLCVDNATIA  780
GMETTGSNEL AWSFCMDSGL TSFLVPDFPL LKTDELPNLF DDTGFEDNID LIFEVGPNQN  840
EANRECVSGY ASSGAMNIEE DNGKERLLSS SSSSSLADSP YSLTTSVSCN YSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.31e-91AP2 family protein