PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741786.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 358aa    MW: 40309.1 Da    PI: 9.5885
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741786.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.86.8e-24957149
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    k+ienk+ r++tf+kR+ g+ KKA+ELS+LCd+eva+i+fs+ gkl+ +
  XP_022741786.1  9 KKIENKTYRHITFAKRKSGLVKKAYELSTLCDVEVALILFSPAGKLFLF 57
                    68*******************************************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MGRVKVQLKK IENKTYRHIT FAKRKSGLVK KAYELSTLCD VEVALILFSP AGKLFLFDGK  60
KRVEDIFAHY LELPARRRGW VQNQELIQRI VTQMIVEADF YNHPTSSSTN KLDIDSQLQE  120
IQKEILMCST QLEDVEKQLQ YFLRNPSCVK SMSEARYHEM ILEETLKLVH FRKRFLEANC  180
SVQPTSQEFG NTIRPHLVDS RENPLPAQKA SSRGSISGSL NYNLIGWQSQ KDLLAPRTFQ  240
SNGLQLPRNL PEPLFENLSS SMTYLQGHQN LAGNDVNGQP KVDGYIQHPA SGIVNANFPP  300
GMAIIQQPRA TSGAAQCEAG SSMRTFRGNS SNLDSNVLDA SIIRFQPKKK VIVALADS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77950.23e-41MIKC_MADS family protein