PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741764.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 308aa MW: 32496.4 Da PI: 9.9928

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	126.5	2.8e-39	65	153	2	88
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssas.nsssg 88 a+k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ ++ s+s+++ ++s+g XP_022741764.1 65 APKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALaATGGSVSQQGaSPSAG 153 789******************************************************************99863333333333133332 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MDPKGSKQPP QEVPNFLSLP PQPQQHPQPQ QQQQQPQNMG ENKPAEIKDF QIVIANKEGK 60 KQQLAPKRSS NKDRHTKVEG RGRRIRMPAL CAARIFQLTR ELGHKSDGET IQWLLQQAEP 120 SIIAATGSGT IPASALAATG GSVSQQGASP SAGLHQKMED LGGSSIGSGS SRTSWAMVGG 180 NLGRPHHVAT GLWPSVPGYG FQSSSGPSTT NLGSESSNYL QKLGFPGFDL PATNMGQMSF 240 TSILGAANQQ LPGLELGLSQ DGHIGVLNPQ ALSQIYQQMG QARVQQHQPA SASAPAPTPT 300 PATTPCQG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	2e-84	TCP family protein