PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022741676.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 368aa MW: 40655.2 Da PI: 8.2572 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 114.5 | 1.4e-35 | 49 | 192 | 2 | 136 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk+++WLl++ak++i+el+ ++ ++++++ + ++ s++++ + ++++k+ XP_022741676.1 49 FGGKDRHSKVCTLKGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKAVDWLLNAAKHEIDELPPLPVPPENFAlNRQMVISNSQEVGVSQSNKEGL 143 689******************************************************************99953333444444333333333333 PP TCP 96 kskksqksaasalnlakesr........akarararertrekmriknkl 136 k+++s + + a l+++s ak++ are t+ek++ ++++ XP_022741676.1 144 KTSSSVNWEDPAGGLSRSSFwssdafwrAKSKDVAREPTNEKNNWNKRN 192 5555555555555555544455566666999999***999999988654 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 368 aa Download sequence |
MIASSKEEDS PTRVQEGNTN DIKVSKGPST SSPSLRLKDP RIVRVSRAFG GKDRHSKVCT 60 LKGLRDRRVR LSVPTAIQLY DLQDRLGLNQ PSKAVDWLLN AAKHEIDELP PLPVPPENFA 120 LNRQMVISNS QEVGVSQSNK EGLKTSSSVN WEDPAGGLSR SSFWSSDAFW RAKSKDVARE 180 PTNEKNNWNK RNEEEKQEGS ENHNGAEVSS DNILQKTNHS PLPALLNNAV PYGSYYHFEP 240 SNFPLSHLGS HGFASHTEEP HNFNIVPVPS TLSLSSGSQI LICPPGATQP LFPPHATPSL 300 EIDPRQEANH LQMLSSGAQN LFPNSLYPPP YSISQSIRPY LSMTPRLPYS HNNSTGSQAD 360 KERGFPSK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G02150.2 | 2e-52 | TCP family protein |