PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741675.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 368aa MW: 40655.2 Da PI: 8.2572

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741675.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	114.5	1.4e-35	49	192	2	136
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 g+kdrhsk++T +g+RdRRvRls+++a++++dLqd+LG+ ++sk+++WLl++ak++i+el+ ++ ++++++ + ++ s++++ + ++++k+ XP_022741675.1 49 FGGKDRHSKVCTLKGLRDRRVRLSVPTAIQLYDLQDRLGLNQPSKAVDWLLNAAKHEIDELPPLPVPPENFAlNRQMVISNSQEVGVSQSNKEGL 143 689****************************************************************99953333444444333333333333 PP TCP 96 kskksqksaasalnlakesr........akarararertrekmriknkl 136 k+++s + + a l+++s ak++ are t+ek++ ++++ XP_022741675.1 144 KTSSSVNWEDPAGGLSRSSFwssdafwrAKSKDVAREPTNEKNNWNKRN 192 5555555555555555544455566666999999*999999988654 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MIASSKEEDS PTRVQEGNTN DIKVSKGPST SSPSLRLKDP RIVRVSRAFG GKDRHSKVCT 60 LKGLRDRRVR LSVPTAIQLY DLQDRLGLNQ PSKAVDWLLN AAKHEIDELP PLPVPPENFA 120 LNRQMVISNS QEVGVSQSNK EGLKTSSSVN WEDPAGGLSR SSFWSSDAFW RAKSKDVARE 180 PTNEKNNWNK RNEEEKQEGS ENHNGAEVSS DNILQKTNHS PLPALLNNAV PYGSYYHFEP 240 SNFPLSHLGS HGFASHTEEP HNFNIVPVPS TLSLSSGSQI LICPPGATQP LFPPHATPSL 300 EIDPRQEANH LQMLSSGAQN LFPNSLYPPP YSISQSIRPY LSMTPRLPYS HNNSTGSQAD 360 KERGFPSK

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MIASSKEEDS PTRVQEGNTN DIKVSKGPST SSPSLRLKDP RIVRVSRAFG GKDRHSKVCT  60
LKGLRDRRVR LSVPTAIQLY DLQDRLGLNQ PSKAVDWLLN AAKHEIDELP PLPVPPENFA  120
LNRQMVISNS QEVGVSQSNK EGLKTSSSVN WEDPAGGLSR SSFWSSDAFW RAKSKDVARE  180
PTNEKNNWNK RNEEEKQEGS ENHNGAEVSS DNILQKTNHS PLPALLNNAV PYGSYYHFEP  240
SNFPLSHLGS HGFASHTEEP HNFNIVPVPS TLSLSSGSQI LICPPGATQP LFPPHATPSL  300
EIDPRQEANH LQMLSSGAQN LFPNSLYPPP YSISQSIRPY LSMTPRLPYS HNNSTGSQAD  360
KERGFPSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.2	2e-52	TCP family protein