PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022741654.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 542aa MW: 59888.8 Da PI: 8.3341 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 51.2 | 2.2e-16 | 343 | 389 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq XP_022741654.1 343 VHNLSERRRRDRINEKMRALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 389 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 542 aa Download sequence |
MNHCIPEWSF EYDLPVSNHR KRLGQDNELV ELLWQNGQVV LHSQTHRKNV PNPCESRQVE 60 KNDQPTSRGG TTSLSYGNSS NLIHDDETVS WIQYPIEDSF EKEFCSNFFS EFPSPVPMEA 120 DNNKPNRQLK QHQQQFVKSS AASPTIFNKT ANSQELNVSS AAQEFQGNPM PPPKFQFDST 180 QQNKNSEGLG KVLNFSPVTE HTGVKSSGGN LIQREVKDSS GMKVGSSYCG SNQIRNDVNL 240 SRGSSNWFGT TTTGLSAGTS KDDARKTIVQ IEKGKTETIE PTVTSSSGAT CKQSTGVISS 300 HKRKSRDGEN NECQSEAAEL QSAAGNKSAQ RSGSSRRSRA AEVHNLSERR RRDRINEKMR 360 ALQELIPHCN KSDKASMLDE AIEYLKSLQL QLQVFQVMWM GSGMAPMMFP GIQHYMSRMG 420 MGMGPPAFPS IHNPLHLSRA PVVDQSISMA FPSQNQAATC QTQQLNQVNY PHHMQNPIFA 480 EQYARFLGFH HMQTASQPMN MFGYGSQTTP QSPMVLAPSS CSIPLTGGAA TINNTSLSGK 540 MG |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 348 | 353 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G43010.2 | 1e-38 | bHLH family protein |