PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022741595.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 678aa MW: 74459.7 Da PI: 5.9955 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.3 | 8.2e-29 | 213 | 266 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_022741595.1 213 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 215 | 265 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_022741595.1 215 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP | |||||||
3 | Response_reg | 75 | 2.8e-25 | 35 | 143 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + + + + + G XP_022741595.1 35 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAETALSMLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKHVVMKGVTHG 127 89*********************.***************999999**********************6654.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_022741595.1 128 ACDYLIKPVRIEALKN 143 ************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 678 aa Download sequence |
MNSNIGKGSM STASSSAAWK AGDVVPDRFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT 60 KCNRAETALS MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKHVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KWKNEWKDFE QSGSVEEGDR QQKQSEDADY 180 SSSANEGNWK SSKKRKDDED ETDERDDSST LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQNS FMSHQEETFG PLSSLNGLDL 300 QTLAATGQLP AESLATLQAA GLGRSTAKSG VPMALVDQRN IFSFENPKLR FGEGQQQHIN 360 GNNKQINLLH GIPMTMEPKQ LVGLHHTAQS IGNVNMQVTS HGAQSGQNNS LLMQMGQPQS 420 RGHILNDATV GHAPRLLSSM GQPILSNGIA ANVSTRNRIP ENIRAPGYNP VSQASSMLNF 480 PMNHASELPG NILPLGSTPG MSSLTSKGTF QEDVNSEIKG SGGFMPSYDI FNDLNQHKPQ 540 SWELQNVSMT SDASQRSNSL QGNLDLTQSV LVQQGISSGQ MNGQNRSAAV VSKAMCSAGD 600 FSEQRNAQNV NQHFNTLLVD NTIRVKSEIV ADVSPANLFP DHFGQEDLMS ALLKQQEGIA 660 PAENEFDFDG YSMDNIPE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 0.0 | ARR-B family protein |