PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022741309.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 456aa    MW: 50817.1 Da    PI: 5.424
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022741309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS311.12.5e-95534532373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.....fsevsPil 91 
                     ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+  f++AL  r a+  s+++k l++ ++++ n s  ++ +++     f++++P++
  XP_022741309.1  53 EQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIVRAAK--SGTCKMLAAMANARCNLSIDIHTFSVielasFVDLTPWH 145
                     79****************************************************..8999999888888888666666665556688******** PP

            GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg....skeeleetgerLakfAeelgvpfefnvl. 181
                     +f++ +aN aIleaveg + +Hi+D+++++++Q p+L++a+a+R egpp +++T+ g ++++       ++ee+g++L +fA++ +v +ef+v+ 
  XP_022741309.1 146 RFGFTAANAAILEAVEGYSVIHIVDLSLTHCMQIPTLIDAIANRLEGPPLVKLTVAGGATEDvppvLDLSYEELGSKLVNFARSRNVMLEFRVVa 240
                     *********************************************************99988998888899**********************98 PP

            GRAS 182 ......vakrledleleeLrvkp.gEalaVnlvlqlhrll................desvsleserdevLklvkslsPkvvvvveqeadhnsesF 253
                            ++ +e++++++L   + gEal++n++++lh+++                 e+ s++s r+ +Lk++++l P+vvv+v+++ad++s+++
  XP_022741309.1 241 ssyadgFSSLIEQVRVQHLVYAEsGEALVINCHMMLHYIPeetlsplsntnsnpysFEPSSSQSLRTMFLKALRGLDPTVVVLVDEDADLTSNNL 335
                     875555555666778888877779******************************9978888888899**************************** PP

            GRAS 254 lerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdg 348
                     + r+ +a++y +  +d++++ lp+ s++r+++E+  + ++i+nvva+eg +r+er e +++W +r+++a F++++++e+a++++k++l +++  g
  XP_022741309.1 336 VCRLRSAFNYLWIPYDTVDTFLPQGSKQRQWYEAN-ICWKIENVVAHEGLQRVERLEPKSRWVQRMRNANFRELSFGEDAVSEVKTMLDEHA-AG 428
                     ***********************************.********************************************************.89 PP

            GRAS 349 yrveeesgslvlgWkdrpLvsvSaW 373
                     + +++e++ lvl+Wk++++v+++aW
  XP_022741309.1 429 WGLKKEEDDLVLTWKGHNVVFATAW 453
                     99*********************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MMQLTETTPQ PLHQITPFSI PTMNKNQIQR GRPWPGFPTS KGLGSFGDAN CMEQLLVHCA  60
NAIESNDATL AQQILWVLNN IAPPDGDSNQ RLTCAFLRAL IVRAAKSGTC KMLAAMANAR  120
CNLSIDIHTF SVIELASFVD LTPWHRFGFT AANAAILEAV EGYSVIHIVD LSLTHCMQIP  180
TLIDAIANRL EGPPLVKLTV AGGATEDVPP VLDLSYEELG SKLVNFARSR NVMLEFRVVA  240
SSYADGFSSL IEQVRVQHLV YAESGEALVI NCHMMLHYIP EETLSPLSNT NSNPYSFEPS  300
SSQSLRTMFL KALRGLDPTV VVLVDEDADL TSNNLVCRLR SAFNYLWIPY DTVDTFLPQG  360
SKQRQWYEAN ICWKIENVVA HEGLQRVERL EPKSRWVQRM RNANFRELSF GEDAVSEVKT  420
MLDEHAAGWG LKKEEDDLVL TWKGHNVVFA TAWVPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.10.0GRAS family protein