PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022741126.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 361aa MW: 40115.2 Da PI: 6.874

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022741126.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.5e-12	184	230	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h +Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_022741126.1 184 DHILAERKRREKLSQRFIALSAIIPGL-----KKMDKASVLGDAIKYVKQLQ 230 5899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDSSSAKWLS ELGMDEYNII HQCHMNYLPE LSAAEDVATA LAGGNLKQSF SSESYSSYPN 60 FNTKNTTFSG SSIETSERSA RKQLKNSSSW KSSTTTEHVP QKPSSPTSQI LSFEKSTSLP 120 ANSQQFYNID NVVKPKDETV CSGNMNFSPL ITNGPYENSN YAPKINQGVK RTYSMTRSPS 180 HAQDHILAER KRREKLSQRF IALSAIIPGL KKMDKASVLG DAIKYVKQLQ ERLKVFEEQT 240 KKRTVESVVF VKKSQLSADD ESSSCEENSD GPLSDAALPE IEARVSDNDV LIRIHCEKQN 300 GFVAKILCEI ENLHLSVVNS SVLPFGNSTL DMTIIAQKDA EFNMTVKDLV KDLSVALLKF 360 M

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDSSSAKWLS ELGMDEYNII HQCHMNYLPE LSAAEDVATA LAGGNLKQSF SSESYSSYPN  60
FNTKNTTFSG SSIETSERSA RKQLKNSSSW KSSTTTEHVP QKPSSPTSQI LSFEKSTSLP  120
ANSQQFYNID NVVKPKDETV CSGNMNFSPL ITNGPYENSN YAPKINQGVK RTYSMTRSPS  180
HAQDHILAER KRREKLSQRF IALSAIIPGL KKMDKASVLG DAIKYVKQLQ ERLKVFEEQT  240
KKRTVESVVF VKKSQLSADD ESSSCEENSD GPLSDAALPE IEARVSDNDV LIRIHCEKQN  300
GFVAKILCEI ENLHLSVVNS SVLPFGNSTL DMTIIAQKDA EFNMTVKDLV KDLSVALLKF  360
M

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	194	ERKRRE
2	190	195	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	2e-71	bHLH family protein