PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740585.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 524aa MW: 59034.9 Da PI: 7.2404

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740585.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	65.8	6.5e-21	98	188	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f k l++s+v++ ++ lp f++ h +++++t+tledesg ++ vk+ ++ + l++GW++F++a++L egD++vF+l++ ++f +v XP_022740585.1 98 FAKSLVRSHVGSCFWMGLPGMFCRVHL--PRKDTTITLEDESGHQFHVKY--YAHKTG--LSAGWRQFCSAHNLLEGDVLVFQLVEPTKF--KVY 184 889******************9995..45788************..666544..9********************9876666..999 PP EE-S CS B3 96 vfrk 99 ++r+ XP_022740585.1 185 IIRA 188 9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 524 aa Download sequence
MEDQRVKKEA EEIQQRTTSF ADRRLKSAGE EDLTLAQLSH TPIFKPSSSA VSDSEGKLRS 60 SKKNKSVDDG KCNPEIKSPA MIRAEEVQSN LEPEFPSFAK SLVRSHVGSC FWMGLPGMFC 120 RVHLPRKDTT ITLEDESGHQ FHVKYYAHKT GLSAGWRQFC SAHNLLEGDV LVFQLVEPTK 180 FKVYIIRAND LTELDGALGL LNLDAHTKQS DADDAENDTT VFRSTKRKRP NSLPLADVQK 240 KNKRSGLQRL ACNIGMLAEQ SKNAHTKQSD ADDAERDTTV FRSIKRKRPI SLSLVVVQKK 300 NKRSGLQRLA CNIGIPAEQS ENDSEEVGSE VWEGFKQSVP TIQFKDITSF ENFKILVDGL 360 VIDSELSEDI RIKYYKLCCS QNSFLHENII QGINFKLIVG TILETVNISD AIRACKLTTS 420 RDEFDGWDKT LKAFELLGMN VGFLLTRLRR LVNLAFESAG AADTRRYIEA QTEQAQTQDE 480 IRNLEAKLAE LKGACKTFGV EIESLQSKAE TYKLRFEEEV KAPW

Sequence ? help Back to Top

Protein Sequence Length: 524 aa Download sequence

MEDQRVKKEA EEIQQRTTSF ADRRLKSAGE EDLTLAQLSH TPIFKPSSSA VSDSEGKLRS  60
SKKNKSVDDG KCNPEIKSPA MIRAEEVQSN LEPEFPSFAK SLVRSHVGSC FWMGLPGMFC  120
RVHLPRKDTT ITLEDESGHQ FHVKYYAHKT GLSAGWRQFC SAHNLLEGDV LVFQLVEPTK  180
FKVYIIRAND LTELDGALGL LNLDAHTKQS DADDAENDTT VFRSTKRKRP NSLPLADVQK  240
KNKRSGLQRL ACNIGMLAEQ SKNAHTKQSD ADDAERDTTV FRSIKRKRPI SLSLVVVQKK  300
NKRSGLQRLA CNIGIPAEQS ENDSEEVGSE VWEGFKQSVP TIQFKDITSF ENFKILVDGL  360
VIDSELSEDI RIKYYKLCCS QNSFLHENII QGINFKLIVG TILETVNISD AIRACKLTTS  420
RDEFDGWDKT LKAFELLGMN VGFLLTRLRR LVNLAFESAG AADTRRYIEA QTEQAQTQDE  480
IRNLEAKLAE LKGACKTFGV EIESLQSKAE TYKLRFEEEV KAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	9e-36	B3 family protein