PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740525.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 389aa MW: 44485.1 Da PI: 6.6369

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740525.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	48.3	2.5e-15	69	128	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+++GV++++++gr++A+++d s+ k+ k+++lg ++ +e Aa+a++ a++k++g XP_022740525.1 69 SRFRGVSRHRWTGRYEAHLWDkLSWnFTqkKKgKQVYLGAYDDEEAAARAYDLAALKYWG 128 789****************888862256447***********************98 PP
2	AP2	52.9	8.9e-17	171	222	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa+a++ a+ +++g XP_022740525.1 171 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYSTQEEAARAYDIAAIEYRG 222 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MEMTMVKDEQ CLGRRRMCSA DGEVQAVRCV KRRRRDPASV ALGCDDNQDQ QRQQQNEQTN 60 GATTVKRSSR FRGVSRHRWT GRYEAHLWDK LSWNFTQKKK GKQVYLGAYD DEEAAARAYD 120 LAALKYWGTS TFTNFPISDY EKEIEIMQTV TKEEYLASLR RKSSGFSRGV SKYRGVARHH 180 HNGRWEARIG RVFGNKYLYL GTYSTQEEAA RAYDIAAIEY RGTNAVTNFD LSTYFRWLKP 240 GTNNLVAANE SLAMTEPESL QLTSSYSPRE ESKPSFHHSF ATDYLNSPQK QEVLETKLPF 300 NSYNKSSSSP TALGLLLRSS IFQELVEKNA NVSEDESSTD TVDESKNQQA GSDDEFSGLF 360 YDETYDFPFI CSSGQDNIEL QERAFPLSF

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MEMTMVKDEQ CLGRRRMCSA DGEVQAVRCV KRRRRDPASV ALGCDDNQDQ QRQQQNEQTN  60
GATTVKRSSR FRGVSRHRWT GRYEAHLWDK LSWNFTQKKK GKQVYLGAYD DEEAAARAYD  120
LAALKYWGTS TFTNFPISDY EKEIEIMQTV TKEEYLASLR RKSSGFSRGV SKYRGVARHH  180
HNGRWEARIG RVFGNKYLYL GTYSTQEEAA RAYDIAAIEY RGTNAVTNFD LSTYFRWLKP  240
GTNNLVAANE SLAMTEPESL QLTSSYSPRE ESKPSFHHSF ATDYLNSPQK QEVLETKLPF  300
NSYNKSSSSP TALGLLLRSS IFQELVEKNA NVSEDESSTD TVDESKNQQA GSDDEFSGLF  360
YDETYDFPFI CSSGQDNIEL QERAFPLSF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	35	RRRMCSADGEVQAVRCVKRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G54320.3	7e-81	AP2 family protein