PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022740523.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YB | ||||||||
Protein Properties | Length: 220aa MW: 23997.5 Da PI: 7.598 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 182.2 | 4.4e-57 | 25 | 120 | 2 | 97 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 +eqdrflPianvsrimkk lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl+kyre+ege XP_022740523.1 25 KEQDRFLPIANVSRIMKKSLPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNKYRETEGE 119 89********************************************************************************************9 PP NF-YB 97 k 97 k XP_022740523.1 120 K 120 7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MAGKRNQTSP IGSPSSGNIS DSCSKEQDRF LPIANVSRIM KKSLPANAKI SKDAKETVQE 60 CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE NYVGPLKVYL NKYRETEGEK 120 NSMASRQEQE DQSSTNAAIN HGAAGANQFN HVNAAISANA PDHFQGYSSG FFSPGAQVTH 180 PQNYGENLMK AGGFNTSMIR ENGDGNGNKT MAAHLHRVDW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 1e-66 | NF-YB family protein |