PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740523.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YB
Protein Properties Length: 220aa    MW: 23997.5 Da    PI: 7.598
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740523.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.24.4e-5725120297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     +eqdrflPianvsrimkk lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yv plkvyl+kyre+ege
  XP_022740523.1  25 KEQDRFLPIANVSRIMKKSLPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNKYRETEGE 119
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_022740523.1 120 K 120
                     7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAGKRNQTSP IGSPSSGNIS DSCSKEQDRF LPIANVSRIM KKSLPANAKI SKDAKETVQE  60
CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE NYVGPLKVYL NKYRETEGEK  120
NSMASRQEQE DQSSTNAAIN HGAAGANQFN HVNAAISANA PDHFQGYSSG FFSPGAQVTH  180
PQNYGENLMK AGGFNTSMIR ENGDGNGNKT MAAHLHRVDW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.11e-66NF-YB family protein