PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740265.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 511aa MW: 56396.2 Da PI: 6.2682

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740265.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	47.5	4.3e-15	227	286	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022740265.1 227 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqaRKgRQVYLGGYDKEEKAARAYDLAALKYWG 286 57*****************666664478446***********************98 PP
2	AP2	49.8	8.5e-16	329	380	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++grW A+I + +k +lg+f t+eeAa+a++ a+ k++g XP_022740265.1 329 SIYRGVTRHHQQGRWQARIGRVAG---NKDLYLGTFATEEEAAEAYDIAAIKFRG 380 57**************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MASASNWLSF SLSTMEMLRS SSEPQFVSYE GSSSAVSPHY LIDNFYANGW TNPKHQVFFT 60 EGEENQSNEA QPPAMADESP ILTSFHQQAP KLEDFLGDSS SIVRYSDSQT ETQDSSLTQI 120 YDHSGSAYFN EHQDLKAITG FQAFSTNSGS EVDDSASMGR THSTAVEFPG HSIESSGTEL 180 GFSNCPTAGA LSLGVNQSCE NNNNKAIVSV DSDCSKKIAD TFGQRTSIYR GVTRHRWTGR 240 YEAHLWDNSC RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT TNFLISNYSK 300 ELEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT 360 FATEEEAAEA YDIAAIKFRG VNAVTNFEMN RYDVEAIAKS SLPIGGAAKR LKLSLETEQK 420 PIVNHEQQPH SSFNSNSISS APMQPISAIP CGIPFDSAAA AAFYQQNLYH HLQTANIGIS 480 DPPGSSSTMA TPMTVMSQPA AEFFFWPHQS Y

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MASASNWLSF SLSTMEMLRS SSEPQFVSYE GSSSAVSPHY LIDNFYANGW TNPKHQVFFT  60
EGEENQSNEA QPPAMADESP ILTSFHQQAP KLEDFLGDSS SIVRYSDSQT ETQDSSLTQI  120
YDHSGSAYFN EHQDLKAITG FQAFSTNSGS EVDDSASMGR THSTAVEFPG HSIESSGTEL  180
GFSNCPTAGA LSLGVNQSCE NNNNKAIVSV DSDCSKKIAD TFGQRTSIYR GVTRHRWTGR  240
YEAHLWDNSC RREGQARKGR QVYLGGYDKE EKAARAYDLA ALKYWGPTAT TNFLISNYSK  300
ELEEMKHMTK QEFIASLRRK SSGFSRGASI YRGVTRHHQQ GRWQARIGRV AGNKDLYLGT  360
FATEEEAAEA YDIAAIKFRG VNAVTNFEMN RYDVEAIAKS SLPIGGAAKR LKLSLETEQK  420
PIVNHEQQPH SSFNSNSISS APMQPISAIP CGIPFDSAAA AAFYQQNLYH HLQTANIGIS  480
DPPGSSSTMA TPMTVMSQPA AEFFFWPHQS Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10510.2	0.0	AP2 family protein