PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022740199.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 507aa    MW: 56414 Da    PI: 7.2615
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022740199.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.9e-17155204155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022740199.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 204
                     78*******************......55************************997 PP

2AP243.58e-14247297155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+t+ eAa+a+++a+ k +g
  XP_022740199.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDRAAIKCNG 297
                     89********.7******5553..2.26**********99**********99776 PP

Sequence ? help Back to Top
Protein Sequence    Length: 507 aa     Download sequence    
MWDLNDSPDQ LRDDESEGCS SQKTSIDGDE DKGKRVGSLS NSSSSAVVIE DGSEEEDGER  60
GKATLKKRSS KIFGFSVPHE EKSMESDPAP VTRQFFPLDQ DQEMGTSSGG SGTGFPRAHW  120
VGIKFCQSEP LVPGKSVEVS QPMKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTALA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST  240
GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKCNGKDA  300
VTNFDPSIYD NELNSGGNAG DHNLDLSLGN STSKQNNLEF FADRQNATGD QHSLPPEADW  360
RNRGISSKLN LQQEPCGSDD AHHRRSDGYG EAETMQLLSQ THIQSPASIK SNEGHRYGQF  420
RRPGGNNMFH INPPHINPST YQIHFPRSSN GGRFGSDLSL STSDQQWQSG PHQLFGNSAA  480
SSGFPSPIRP SQTWLQKNGF HSLMRPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.11e-125AP2 family protein