PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740198.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 510aa MW: 56731.3 Da PI: 7.098

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.5	2.9e-17	155	204	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g XP_022740198.1 155 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTALAAARAYDRAAIKFRG 204 78*****************......55**********************997 PP
2	AP2	43.5	8.1e-14	247	297	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g XP_022740198.1 247 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDRAAIKCNG 297 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MWDLNDSPDQ LRDDESEGCS SQKTSIDGDE DKGKRVGSLS NSSSSAVVIE DGSEEEDGER 60 GKATLKKRSS KIFGFSVPHE EKSMESDPAP VTRQFFPLDQ DQEMGTSSGG SGTGFPRAHW 120 VGIKFCQSEP LVPGKSVEVS QPMKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV 180 YLGGFDTALA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST 240 GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKCNGKDA 300 VTNFDPSIYD NELNSGETSG NAGDHNLDLS LGNSTSKQNN LEFFADRQNA TGDQHSLPPE 360 ADWRNRGISS KLNLQQEPCG SDDAHHRRSD GYGEAETMQL LSQTHIQSPA SIKSNEGHRY 420 GQFRRPGGNN MFHINPPHIN PSTYQIHFPR SSNGGRFGSD LSLSTSDQQW QSGPHQLFGN 480 SAASSGFPSP IRPSQTWLQK NGFHSLMRPS

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MWDLNDSPDQ LRDDESEGCS SQKTSIDGDE DKGKRVGSLS NSSSSAVVIE DGSEEEDGER  60
GKATLKKRSS KIFGFSVPHE EKSMESDPAP VTRQFFPLDQ DQEMGTSSGG SGTGFPRAHW  120
VGIKFCQSEP LVPGKSVEVS QPMKKSRRGP RSRSSQYRGV TFYRRTGRWE SHIWDCGKQV  180
YLGGFDTALA AARAYDRAAI KFRGVEADIN FSIEDYEEDL KQMSNLTKEE FVHVLRRQST  240
GFPRGSSKYR GVTLHKCGRW EARMGQFLGK KYVYLGLFDT EIEAARAYDR AAIKCNGKDA  300
VTNFDPSIYD NELNSGETSG NAGDHNLDLS LGNSTSKQNN LEFFADRQNA TGDQHSLPPE  360
ADWRNRGISS KLNLQQEPCG SDDAHHRRSD GYGEAETMQL LSQTHIQSPA SIKSNEGHRY  420
GQFRRPGGNN MFHINPPHIN PSTYQIHFPR SSNGGRFGSD LSLSTSDQQW QSGPHQLFGN  480
SAASSGFPSP IRPSQTWLQK NGFHSLMRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-126	AP2 family protein